Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb1Q91Y08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb1Q91Y08 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Gm11687-201ENSMUST00000118911 886 ntBASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhb1Q91Y08 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb1Q91Y08 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdhb1Q91Y08 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb1Q91Y08 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Pcdhb1Q91Y08 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb1Q91Y08 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb1Q91Y08 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb1Q91Y08 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhb1Q91Y08 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Pcdhb1Q91Y08 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb1Q91Y08 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb1Q91Y08 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb1Q91Y08 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhb1Q91Y08 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcdhb1Q91Y08 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdhb1Q91Y08 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb1Q91Y08 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb1Q91Y08 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb1Q91Y08 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb1Q91Y08 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb1Q91Y08 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb1Q91Y08 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb1Q91Y08 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb1Q91Y08 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb1Q91Y08 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdhb1Q91Y08 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.95■■□□□ 1.26
Pcdhb1Q91Y08 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb1Q91Y08 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb1Q91Y08 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb1Q91Y08 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhb1Q91Y08 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb1Q91Y08 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhb1Q91Y08 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Pcdhb1Q91Y08 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Pcdhb1Q91Y08 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb1Q91Y08 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb1Q91Y08 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb1Q91Y08 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.89■■□□□ 1.25
Pcdhb1Q91Y08 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb1Q91Y08 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb1Q91Y08 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb1Q91Y08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb1Q91Y08 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhb1Q91Y08 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb1Q91Y08 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Gm11175-201ENSMUST00000116172 543 ntBASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Gm22567-201ENSMUST00000175542 342 ntBASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.86■■□□□ 1.25
Pcdhb1Q91Y08 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb1Q91Y08 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb1Q91Y08 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhb1Q91Y08 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pcdhb1Q91Y08 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhb1Q91Y08 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb1Q91Y08 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb1Q91Y08 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb1Q91Y08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb1Q91Y08 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb1Q91Y08 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb1Q91Y08 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms