Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb20Q91XZ9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb20Q91XZ9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb20Q91XZ9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb20Q91XZ9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb20Q91XZ9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb20Q91XZ9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb20Q91XZ9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb20Q91XZ9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb20Q91XZ9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb20Q91XZ9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb20Q91XZ9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb20Q91XZ9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb20Q91XZ9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb20Q91XZ9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb20Q91XZ9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb20Q91XZ9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb20Q91XZ9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb20Q91XZ9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb20Q91XZ9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdhb20Q91XZ9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb20Q91XZ9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhb20Q91XZ9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.08■□□□□ 0.97
Pcdhb20Q91XZ9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcdhb20Q91XZ9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb20Q91XZ9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb20Q91XZ9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb20Q91XZ9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhb20Q91XZ9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb20Q91XZ9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb20Q91XZ9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb20Q91XZ9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb20Q91XZ9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb20Q91XZ9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb20Q91XZ9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb20Q91XZ9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb20Q91XZ9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhb20Q91XZ9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb20Q91XZ9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb20Q91XZ9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Pcdhb20Q91XZ9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms