Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh18Q8VHR0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdh18Q8VHR0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh18Q8VHR0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh18Q8VHR0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh18Q8VHR0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh18Q8VHR0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh18Q8VHR0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh18Q8VHR0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh18Q8VHR0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh18Q8VHR0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh18Q8VHR0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh18Q8VHR0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh18Q8VHR0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Pcdh18Q8VHR0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh18Q8VHR0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh18Q8VHR0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdh18Q8VHR0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.1■□□□□ 0.97
Pcdh18Q8VHR0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh18Q8VHR0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh18Q8VHR0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh18Q8VHR0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdh18Q8VHR0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh18Q8VHR0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.08■□□□□ 0.97
Pcdh18Q8VHR0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh18Q8VHR0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh18Q8VHR0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh18Q8VHR0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh18Q8VHR0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh18Q8VHR0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdh18Q8VHR0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh18Q8VHR0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh18Q8VHR0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh18Q8VHR0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh18Q8VHR0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh18Q8VHR0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh18Q8VHR0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh18Q8VHR0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh18Q8VHR0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh18Q8VHR0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh18Q8VHR0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh18Q8VHR0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh18Q8VHR0 Gm8503-201ENSMUST00000118131 455 ntBASIC21.02■□□□□ 0.96
Pcdh18Q8VHR0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.02■□□□□ 0.96
Pcdh18Q8VHR0 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.95
Pcdh18Q8VHR0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdh18Q8VHR0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.02■□□□□ 0.95
Pcdh18Q8VHR0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh18Q8VHR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.01■□□□□ 0.95
Pcdh18Q8VHR0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh18Q8VHR0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh18Q8VHR0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh18Q8VHR0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh18Q8VHR0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdh18Q8VHR0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh18Q8VHR0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh18Q8VHR0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms