Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps4aQ8VEJ9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps4aQ8VEJ9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.26■□□□□ 0.99
Vps4aQ8VEJ9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Vps4aQ8VEJ9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.25■□□□□ 0.99
Vps4aQ8VEJ9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4aQ8VEJ9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Vps4aQ8VEJ9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4aQ8VEJ9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps4aQ8VEJ9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4aQ8VEJ9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Vps4aQ8VEJ9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vps4aQ8VEJ9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4aQ8VEJ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4aQ8VEJ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Vps4aQ8VEJ9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4aQ8VEJ9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4aQ8VEJ9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4aQ8VEJ9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps4aQ8VEJ9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4aQ8VEJ9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4aQ8VEJ9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4aQ8VEJ9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4aQ8VEJ9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4aQ8VEJ9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4aQ8VEJ9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps4aQ8VEJ9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Vps4aQ8VEJ9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps4aQ8VEJ9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.14■□□□□ 0.97
Vps4aQ8VEJ9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.14■□□□□ 0.97
Vps4aQ8VEJ9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Vps4aQ8VEJ9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps4aQ8VEJ9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Vps4aQ8VEJ9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Vps4aQ8VEJ9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4aQ8VEJ9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Vps4aQ8VEJ9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps4aQ8VEJ9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4aQ8VEJ9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps4aQ8VEJ9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps4aQ8VEJ9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.1■□□□□ 0.97
Vps4aQ8VEJ9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps4aQ8VEJ9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.1■□□□□ 0.97
Vps4aQ8VEJ9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps4aQ8VEJ9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps4aQ8VEJ9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms