Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ddx39aQ8VDW0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx39aQ8VDW0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ddx39aQ8VDW0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.67■■□□□ 1.54
Ddx39aQ8VDW0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.67■■□□□ 1.54
Ddx39aQ8VDW0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.67■■□□□ 1.54
Ddx39aQ8VDW0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Gm43566-201ENSMUST00000196851 808 ntBASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Gm45444-201ENSMUST00000211394 898 ntBASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ddx39aQ8VDW0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.65■■□□□ 1.54
Ddx39aQ8VDW0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx39aQ8VDW0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.65■■□□□ 1.54
Ddx39aQ8VDW0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx39aQ8VDW0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ddx39aQ8VDW0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ddx39aQ8VDW0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.64■■□□□ 1.54
Ddx39aQ8VDW0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx39aQ8VDW0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ddx39aQ8VDW0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ddx39aQ8VDW0 Gm15820-201ENSMUST00000201566 728 ntBASIC24.62■■□□□ 1.53
Ddx39aQ8VDW0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx39aQ8VDW0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Ddx39aQ8VDW0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.62■■□□□ 1.53
Ddx39aQ8VDW0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ddx39aQ8VDW0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx39aQ8VDW0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.6■■□□□ 1.53
Ddx39aQ8VDW0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx39aQ8VDW0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.6■■□□□ 1.53
Ddx39aQ8VDW0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx39aQ8VDW0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx39aQ8VDW0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx39aQ8VDW0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx39aQ8VDW0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Ddx39aQ8VDW0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.57■■□□□ 1.52
Ddx39aQ8VDW0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx39aQ8VDW0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx39aQ8VDW0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx39aQ8VDW0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx39aQ8VDW0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Ddx39aQ8VDW0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx39aQ8VDW0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx39aQ8VDW0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx39aQ8VDW0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
Ddx39aQ8VDW0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx39aQ8VDW0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx39aQ8VDW0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.52■■□□□ 1.52
Ddx39aQ8VDW0 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.52■■□□□ 1.52
Ddx39aQ8VDW0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx39aQ8VDW0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
Ddx39aQ8VDW0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx39aQ8VDW0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx39aQ8VDW0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx39aQ8VDW0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx39aQ8VDW0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx39aQ8VDW0 Gm22567-201ENSMUST00000175542 342 ntBASIC24.49■■□□□ 1.51
Ddx39aQ8VDW0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx39aQ8VDW0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.48■■□□□ 1.51
Ddx39aQ8VDW0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx39aQ8VDW0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms