Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vps39Q8R5L3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.05■■□□□ 1.12
Vps39Q8R5L3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vps39Q8R5L3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
Vps39Q8R5L3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.03■■□□□ 1.12
Vps39Q8R5L3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.03■■□□□ 1.12
Vps39Q8R5L3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps39Q8R5L3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.03■■□□□ 1.12
Vps39Q8R5L3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Vps39Q8R5L3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps39Q8R5L3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.02■■□□□ 1.11
Vps39Q8R5L3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Vps39Q8R5L3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Vps39Q8R5L3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps39Q8R5L3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Vps39Q8R5L3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Vps39Q8R5L3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Gm28731-201ENSMUST00000185564 1569 ntBASIC22■■□□□ 1.11
Vps39Q8R5L3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Gm7199-201ENSMUST00000118327 1485 ntBASIC22■■□□□ 1.11
Vps39Q8R5L3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps39Q8R5L3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Vps39Q8R5L3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vps39Q8R5L3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps39Q8R5L3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps39Q8R5L3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.97■■□□□ 1.11
Vps39Q8R5L3 Gm6311-201ENSMUST00000073790 878 ntBASIC21.97■■□□□ 1.11
Vps39Q8R5L3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps39Q8R5L3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Vps39Q8R5L3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps39Q8R5L3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Vps39Q8R5L3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps39Q8R5L3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps39Q8R5L3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps39Q8R5L3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Vps39Q8R5L3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vps39Q8R5L3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps39Q8R5L3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps39Q8R5L3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Vps39Q8R5L3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.91■■□□□ 1.1
Vps39Q8R5L3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps39Q8R5L3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps39Q8R5L3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps39Q8R5L3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.9■■□□□ 1.1
Vps39Q8R5L3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms