Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pspc1Q8R326 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Pspc1Q8R326 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pspc1Q8R326 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Pspc1Q8R326 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Gm15546-201ENSMUST00000122095 826 ntBASIC25.59■■□□□ 1.69
Pspc1Q8R326 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pspc1Q8R326 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.58■■□□□ 1.69
Pspc1Q8R326 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.58■■□□□ 1.69
Pspc1Q8R326 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pspc1Q8R326 Gm13238-201ENSMUST00000117655 780 ntBASIC25.57■■□□□ 1.68
Pspc1Q8R326 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pspc1Q8R326 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pspc1Q8R326 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pspc1Q8R326 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pspc1Q8R326 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pspc1Q8R326 Gm43566-201ENSMUST00000196851 808 ntBASIC25.56■■□□□ 1.68
Pspc1Q8R326 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pspc1Q8R326 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pspc1Q8R326 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pspc1Q8R326 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pspc1Q8R326 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.55■■□□□ 1.68
Pspc1Q8R326 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pspc1Q8R326 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pspc1Q8R326 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Pspc1Q8R326 Gm45444-201ENSMUST00000211394 898 ntBASIC25.54■■□□□ 1.68
Pspc1Q8R326 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.54■■□□□ 1.68
Pspc1Q8R326 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pspc1Q8R326 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.53■■□□□ 1.68
Pspc1Q8R326 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Pspc1Q8R326 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pspc1Q8R326 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pspc1Q8R326 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pspc1Q8R326 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pspc1Q8R326 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pspc1Q8R326 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pspc1Q8R326 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pspc1Q8R326 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pspc1Q8R326 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.48■■□□□ 1.67
Pspc1Q8R326 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pspc1Q8R326 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Pspc1Q8R326 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pspc1Q8R326 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pspc1Q8R326 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Pspc1Q8R326 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.47■■□□□ 1.67
Pspc1Q8R326 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pspc1Q8R326 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pspc1Q8R326 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pspc1Q8R326 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.46■■□□□ 1.67
Pspc1Q8R326 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pspc1Q8R326 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pspc1Q8R326 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Pspc1Q8R326 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Pspc1Q8R326 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pspc1Q8R326 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pspc1Q8R326 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pspc1Q8R326 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pspc1Q8R326 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Pspc1Q8R326 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pspc1Q8R326 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pspc1Q8R326 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.41■■□□□ 1.66
Pspc1Q8R326 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Pspc1Q8R326 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pspc1Q8R326 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Pspc1Q8R326 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms