Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Gm10232-201ENSMUST00000089221 720 ntBASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rtn4rl1Q8K0S5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Etf1-202ENSMUST00000180351 108 ntBASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Rtn4rl1Q8K0S5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms