Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc47a1Q8K0H1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc47a1Q8K0H1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Slc47a1Q8K0H1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc47a1Q8K0H1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc47a1Q8K0H1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc47a1Q8K0H1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc47a1Q8K0H1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.65■■□□□ 1.06
Slc47a1Q8K0H1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc47a1Q8K0H1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.64■■□□□ 1.06
Slc47a1Q8K0H1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.64■■□□□ 1.05
Slc47a1Q8K0H1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc47a1Q8K0H1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Slc47a1Q8K0H1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc47a1Q8K0H1 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.63■■□□□ 1.05
Slc47a1Q8K0H1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc47a1Q8K0H1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc47a1Q8K0H1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc47a1Q8K0H1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc47a1Q8K0H1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc47a1Q8K0H1 Gm9812-201ENSMUST00000061934 968 ntBASIC21.62■■□□□ 1.05
Slc47a1Q8K0H1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc47a1Q8K0H1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc47a1Q8K0H1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc47a1Q8K0H1 Gm6311-201ENSMUST00000073790 878 ntBASIC21.61■■□□□ 1.05
Slc47a1Q8K0H1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc47a1Q8K0H1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc47a1Q8K0H1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc47a1Q8K0H1 Gm11175-201ENSMUST00000116172 543 ntBASIC21.59■■□□□ 1.05
Slc47a1Q8K0H1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Slc47a1Q8K0H1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.59■■□□□ 1.05
Slc47a1Q8K0H1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.58■■□□□ 1.05
Slc47a1Q8K0H1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.58■■□□□ 1.05
Slc47a1Q8K0H1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Slc47a1Q8K0H1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.58■■□□□ 1.05
Slc47a1Q8K0H1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc47a1Q8K0H1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
Slc47a1Q8K0H1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc47a1Q8K0H1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc47a1Q8K0H1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Slc47a1Q8K0H1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Slc47a1Q8K0H1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc47a1Q8K0H1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc47a1Q8K0H1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc47a1Q8K0H1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc47a1Q8K0H1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc47a1Q8K0H1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc47a1Q8K0H1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Slc47a1Q8K0H1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc47a1Q8K0H1 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.52■■□□□ 1.04
Slc47a1Q8K0H1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc47a1Q8K0H1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc47a1Q8K0H1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Slc47a1Q8K0H1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc47a1Q8K0H1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Slc47a1Q8K0H1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc47a1Q8K0H1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc47a1Q8K0H1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms