Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd3Q8CIK8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Gm12366-201ENSMUST00000121722 873 ntBASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Gm27502-201ENSMUST00000183495 199 ntBASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Gm5786-201ENSMUST00000085368 882 ntBASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd3Q8CIK8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd3Q8CIK8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfwd3Q8CIK8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd3Q8CIK8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd3Q8CIK8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.6■□□□□ 0.89
Rfwd3Q8CIK8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd3Q8CIK8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd3Q8CIK8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd3Q8CIK8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd3Q8CIK8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd3Q8CIK8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd3Q8CIK8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.58■□□□□ 0.89
Rfwd3Q8CIK8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rfwd3Q8CIK8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd3Q8CIK8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd3Q8CIK8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd3Q8CIK8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd3Q8CIK8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rfwd3Q8CIK8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd3Q8CIK8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfwd3Q8CIK8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfwd3Q8CIK8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfwd3Q8CIK8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfwd3Q8CIK8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rfwd3Q8CIK8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.54■□□□□ 0.88
Rfwd3Q8CIK8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Rfwd3Q8CIK8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfwd3Q8CIK8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.53■□□□□ 0.88
Rfwd3Q8CIK8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfwd3Q8CIK8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms