Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim5Q8CI51 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim5Q8CI51 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Pdlim5Q8CI51 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Pdlim5Q8CI51 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.39■□□□□ 0.85
Pdlim5Q8CI51 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim5Q8CI51 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim5Q8CI51 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.38■□□□□ 0.85
Pdlim5Q8CI51 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim5Q8CI51 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim5Q8CI51 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Terc-201ENSMUST00000082862 423 ntBASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim5Q8CI51 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim5Q8CI51 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim5Q8CI51 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.35■□□□□ 0.85
Pdlim5Q8CI51 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim5Q8CI51 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pdlim5Q8CI51 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pdlim5Q8CI51 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim5Q8CI51 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim5Q8CI51 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pdlim5Q8CI51 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.33■□□□□ 0.85
Pdlim5Q8CI51 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim5Q8CI51 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.33■□□□□ 0.84
Pdlim5Q8CI51 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim5Q8CI51 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pdlim5Q8CI51 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pdlim5Q8CI51 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim5Q8CI51 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim5Q8CI51 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim5Q8CI51 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pdlim5Q8CI51 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim5Q8CI51 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim5Q8CI51 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.29■□□□□ 0.84
Pdlim5Q8CI51 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim5Q8CI51 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.29■□□□□ 0.84
Pdlim5Q8CI51 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pdlim5Q8CI51 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim5Q8CI51 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pdlim5Q8CI51 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim5Q8CI51 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim5Q8CI51 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Pdlim5Q8CI51 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim5Q8CI51 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim5Q8CI51 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim5Q8CI51 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.25■□□□□ 0.83
Pdlim5Q8CI51 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.25■□□□□ 0.83
Pdlim5Q8CI51 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.24■□□□□ 0.83
Pdlim5Q8CI51 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.23■□□□□ 0.83
Pdlim5Q8CI51 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim5Q8CI51 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.23■□□□□ 0.83
Pdlim5Q8CI51 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim5Q8CI51 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pdlim5Q8CI51 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim5Q8CI51 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim5Q8CI51 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.22■□□□□ 0.83
Pdlim5Q8CI51 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdlim5Q8CI51 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms