Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hist3h2bbQ8CGP0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist3h2bbQ8CGP0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist3h2bbQ8CGP0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Hist3h2bbQ8CGP0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist3h2bbQ8CGP0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist3h2bbQ8CGP0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist3h2bbQ8CGP0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hist3h2bbQ8CGP0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.9■□□□□ 0.3
Hist3h2bbQ8CGP0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.89■□□□□ 0.29
Hist3h2bbQ8CGP0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist3h2bbQ8CGP0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.87■□□□□ 0.29
Hist3h2bbQ8CGP0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hist3h2bbQ8CGP0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hist3h2bbQ8CGP0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Hist3h2bbQ8CGP0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hist3h2bbQ8CGP0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist3h2bbQ8CGP0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist3h2bbQ8CGP0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hist3h2bbQ8CGP0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.82■□□□□ 0.28
Hist3h2bbQ8CGP0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist3h2bbQ8CGP0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms