Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Trim52Q8CDV4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Trim52Q8CDV4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim52Q8CDV4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim52Q8CDV4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.91■■■□□ 2.06
Trim52Q8CDV4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim52Q8CDV4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim52Q8CDV4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Trim52Q8CDV4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Trim52Q8CDV4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.9■■■□□ 2.06
Trim52Q8CDV4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Trim52Q8CDV4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Trim52Q8CDV4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Trim52Q8CDV4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.88■■■□□ 2.05
Trim52Q8CDV4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Trim52Q8CDV4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Trim52Q8CDV4 Gm22567-201ENSMUST00000175542 342 ntBASIC27.87■■■□□ 2.05
Trim52Q8CDV4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trim52Q8CDV4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trim52Q8CDV4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Trim52Q8CDV4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trim52Q8CDV4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trim52Q8CDV4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trim52Q8CDV4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Trim52Q8CDV4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Trim52Q8CDV4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Trim52Q8CDV4 Gm15820-201ENSMUST00000201566 728 ntBASIC27.84■■■□□ 2.05
Trim52Q8CDV4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Trim52Q8CDV4 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.83■■■□□ 2.05
Trim52Q8CDV4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Trim52Q8CDV4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Trim52Q8CDV4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Trim52Q8CDV4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Trim52Q8CDV4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
Trim52Q8CDV4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.81■■■□□ 2.04
Trim52Q8CDV4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.81■■■□□ 2.04
Trim52Q8CDV4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Trim52Q8CDV4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
Trim52Q8CDV4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.8■■■□□ 2.04
Trim52Q8CDV4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Trim52Q8CDV4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Trim52Q8CDV4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.79■■■□□ 2.04
Trim52Q8CDV4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Trim52Q8CDV4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Trim52Q8CDV4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Trim52Q8CDV4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC27.79■■■□□ 2.04
Trim52Q8CDV4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim52Q8CDV4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim52Q8CDV4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.76■■■□□ 2.04
Trim52Q8CDV4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim52Q8CDV4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim52Q8CDV4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim52Q8CDV4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim52Q8CDV4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Trim52Q8CDV4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Trim52Q8CDV4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim52Q8CDV4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim52Q8CDV4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim52Q8CDV4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim52Q8CDV4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim52Q8CDV4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim52Q8CDV4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trim52Q8CDV4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trim52Q8CDV4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Trim52Q8CDV4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Trim52Q8CDV4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Trim52Q8CDV4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Trim52Q8CDV4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Trim52Q8CDV4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.71■■■□□ 2.03
Trim52Q8CDV4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Trim52Q8CDV4 Gm18755-201ENSMUST00000218030 1099 ntBASIC27.7■■■□□ 2.02
Trim52Q8CDV4 Rps24-207ENSMUST00000224568 714 ntBASIC27.7■■■□□ 2.02
Trim52Q8CDV4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Trim52Q8CDV4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim52Q8CDV4 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.69■■■□□ 2.02
Trim52Q8CDV4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim52Q8CDV4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim52Q8CDV4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Trim52Q8CDV4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.68■■■□□ 2.02
Trim52Q8CDV4 Gm45102-201ENSMUST00000207427 857 ntBASIC27.68■■■□□ 2.02
Trim52Q8CDV4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim52Q8CDV4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC27.68■■■□□ 2.02
Trim52Q8CDV4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms