Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scfd1Q8BRF7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Scfd1Q8BRF7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scfd1Q8BRF7 Gm15546-201ENSMUST00000122095 826 ntBASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scfd1Q8BRF7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Scfd1Q8BRF7 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.58■■□□□ 1.68
Scfd1Q8BRF7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scfd1Q8BRF7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scfd1Q8BRF7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
Scfd1Q8BRF7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scfd1Q8BRF7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Scfd1Q8BRF7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Scfd1Q8BRF7 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.56■■□□□ 1.68
Scfd1Q8BRF7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Scfd1Q8BRF7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Scfd1Q8BRF7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Scfd1Q8BRF7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.53■■□□□ 1.68
Scfd1Q8BRF7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Scfd1Q8BRF7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Scfd1Q8BRF7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
Scfd1Q8BRF7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Scfd1Q8BRF7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Scfd1Q8BRF7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Scfd1Q8BRF7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Scfd1Q8BRF7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Scfd1Q8BRF7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Scfd1Q8BRF7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Scfd1Q8BRF7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.48■■□□□ 1.67
Scfd1Q8BRF7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scfd1Q8BRF7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Scfd1Q8BRF7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Scfd1Q8BRF7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Scfd1Q8BRF7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.47■■□□□ 1.67
Scfd1Q8BRF7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.46■■□□□ 1.67
Scfd1Q8BRF7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Scfd1Q8BRF7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.45■■□□□ 1.67
Scfd1Q8BRF7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Scfd1Q8BRF7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Scfd1Q8BRF7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Scfd1Q8BRF7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scfd1Q8BRF7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Scfd1Q8BRF7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Gm15820-201ENSMUST00000201566 728 ntBASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Scfd1Q8BRF7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Scfd1Q8BRF7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scfd1Q8BRF7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Scfd1Q8BRF7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.38■■□□□ 1.65
Scfd1Q8BRF7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.38■■□□□ 1.65
Scfd1Q8BRF7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Scfd1Q8BRF7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms