Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rhbdd3Q8BP97 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rhbdd3Q8BP97 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rhbdd3Q8BP97 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.18■□□□□ 0.82
Rhbdd3Q8BP97 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhbdd3Q8BP97 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdd3Q8BP97 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdd3Q8BP97 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdd3Q8BP97 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.17■□□□□ 0.82
Rhbdd3Q8BP97 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdd3Q8BP97 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.16■□□□□ 0.82
Rhbdd3Q8BP97 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rhbdd3Q8BP97 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rhbdd3Q8BP97 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rhbdd3Q8BP97 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rhbdd3Q8BP97 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.15■□□□□ 0.82
Rhbdd3Q8BP97 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.14■□□□□ 0.82
Rhbdd3Q8BP97 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhbdd3Q8BP97 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rhbdd3Q8BP97 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rhbdd3Q8BP97 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rhbdd3Q8BP97 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rhbdd3Q8BP97 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhbdd3Q8BP97 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rhbdd3Q8BP97 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rhbdd3Q8BP97 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rhbdd3Q8BP97 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Rhbdd3Q8BP97 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rhbdd3Q8BP97 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rhbdd3Q8BP97 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rhbdd3Q8BP97 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rhbdd3Q8BP97 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rhbdd3Q8BP97 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Terc-201ENSMUST00000082862 423 ntBASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.09■□□□□ 0.81
Rhbdd3Q8BP97 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Rhbdd3Q8BP97 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rhbdd3Q8BP97 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rhbdd3Q8BP97 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rhbdd3Q8BP97 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.08■□□□□ 0.81
Rhbdd3Q8BP97 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rhbdd3Q8BP97 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.07■□□□□ 0.8
Rhbdd3Q8BP97 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rhbdd3Q8BP97 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rhbdd3Q8BP97 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rhbdd3Q8BP97 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.06■□□□□ 0.8
Rhbdd3Q8BP97 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rhbdd3Q8BP97 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.05■□□□□ 0.8
Rhbdd3Q8BP97 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rhbdd3Q8BP97 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rhbdd3Q8BP97 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rhbdd3Q8BP97 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.04■□□□□ 0.8
Rhbdd3Q8BP97 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rhbdd3Q8BP97 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rhbdd3Q8BP97 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Rhbdd3Q8BP97 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rhbdd3Q8BP97 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rhbdd3Q8BP97 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.03■□□□□ 0.8
Rhbdd3Q8BP97 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rhbdd3Q8BP97 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.02■□□□□ 0.8
Rhbdd3Q8BP97 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rhbdd3Q8BP97 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rhbdd3Q8BP97 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Rhbdd3Q8BP97 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms