Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limd2Q8BGB5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limd2Q8BGB5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Rab21-202ENSMUST00000218831 843 ntBASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limd2Q8BGB5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Limd2Q8BGB5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Limd2Q8BGB5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Limd2Q8BGB5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Limd2Q8BGB5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC12.14□□□□□ -0.47
Limd2Q8BGB5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Limd2Q8BGB5 Mipep-204ENSMUST00000225043 1548 ntBASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Limd2Q8BGB5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Limd2Q8BGB5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Limd2Q8BGB5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limd2Q8BGB5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Limd2Q8BGB5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Limd2Q8BGB5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limd2Q8BGB5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms