Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Negr1Q80Z24 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Negr1Q80Z24 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.42■□□□□ 0.7
Negr1Q80Z24 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Negr1Q80Z24 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.41■□□□□ 0.7
Negr1Q80Z24 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Negr1Q80Z24 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Negr1Q80Z24 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.41■□□□□ 0.7
Negr1Q80Z24 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Negr1Q80Z24 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.41■□□□□ 0.7
Negr1Q80Z24 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Negr1Q80Z24 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.39■□□□□ 0.69
Negr1Q80Z24 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Negr1Q80Z24 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Negr1Q80Z24 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
Negr1Q80Z24 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Negr1Q80Z24 Gm11687-201ENSMUST00000118911 886 ntBASIC19.38■□□□□ 0.69
Negr1Q80Z24 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Negr1Q80Z24 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Negr1Q80Z24 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.38■□□□□ 0.69
Negr1Q80Z24 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Negr1Q80Z24 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Negr1Q80Z24 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Negr1Q80Z24 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Negr1Q80Z24 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Negr1Q80Z24 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Negr1Q80Z24 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Gm11175-201ENSMUST00000116172 543 ntBASIC19.35■□□□□ 0.69
Negr1Q80Z24 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Negr1Q80Z24 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Negr1Q80Z24 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Negr1Q80Z24 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Negr1Q80Z24 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Negr1Q80Z24 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Negr1Q80Z24 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Negr1Q80Z24 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.33■□□□□ 0.68
Negr1Q80Z24 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Negr1Q80Z24 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Negr1Q80Z24 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.32■□□□□ 0.68
Negr1Q80Z24 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Negr1Q80Z24 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
Negr1Q80Z24 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Gm44428-201ENSMUST00000204474 874 ntBASIC19.31■□□□□ 0.68
Negr1Q80Z24 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.31■□□□□ 0.68
Negr1Q80Z24 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Negr1Q80Z24 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Negr1Q80Z24 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Negr1Q80Z24 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Negr1Q80Z24 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Negr1Q80Z24 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms