Protein–RNA interactions for Protein: Q80VL3

Prickle3, Prickle planar cell polarity protein 3, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prickle3Q80VL3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prickle3Q80VL3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.82■□□□□ 0.6
Prickle3Q80VL3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
Prickle3Q80VL3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prickle3Q80VL3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.82■□□□□ 0.6
Prickle3Q80VL3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prickle3Q80VL3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prickle3Q80VL3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prickle3Q80VL3 Gm13238-201ENSMUST00000117655 780 ntBASIC18.8■□□□□ 0.6
Prickle3Q80VL3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prickle3Q80VL3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prickle3Q80VL3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prickle3Q80VL3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prickle3Q80VL3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.78■□□□□ 0.6
Prickle3Q80VL3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prickle3Q80VL3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prickle3Q80VL3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prickle3Q80VL3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prickle3Q80VL3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prickle3Q80VL3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prickle3Q80VL3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.77■□□□□ 0.59
Prickle3Q80VL3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.76■□□□□ 0.59
Prickle3Q80VL3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prickle3Q80VL3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prickle3Q80VL3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.74■□□□□ 0.59
Prickle3Q80VL3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prickle3Q80VL3 Amer2-203ENSMUST00000225247 2662 ntBASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prickle3Q80VL3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prickle3Q80VL3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prickle3Q80VL3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prickle3Q80VL3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prickle3Q80VL3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prickle3Q80VL3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.7■□□□□ 0.58
Prickle3Q80VL3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prickle3Q80VL3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prickle3Q80VL3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prickle3Q80VL3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prickle3Q80VL3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prickle3Q80VL3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.68■□□□□ 0.58
Prickle3Q80VL3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prickle3Q80VL3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prickle3Q80VL3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prickle3Q80VL3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.67■□□□□ 0.58
Prickle3Q80VL3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prickle3Q80VL3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Prickle3Q80VL3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prickle3Q80VL3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prickle3Q80VL3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms