Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.27■■□□□ 1.48
Ush1gQ80T11 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Ush1gQ80T11 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.26■■□□□ 1.47
Ush1gQ80T11 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ush1gQ80T11 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ush1gQ80T11 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.26■■□□□ 1.47
Ush1gQ80T11 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Ush1gQ80T11 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ush1gQ80T11 Gm45102-201ENSMUST00000207427 857 ntBASIC24.25■■□□□ 1.47
Ush1gQ80T11 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.24■■□□□ 1.47
Ush1gQ80T11 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Ush1gQ80T11 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ush1gQ80T11 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ush1gQ80T11 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ush1gQ80T11 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.21■■□□□ 1.47
Ush1gQ80T11 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ush1gQ80T11 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ush1gQ80T11 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ush1gQ80T11 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ush1gQ80T11 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ush1gQ80T11 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Ush1gQ80T11 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ush1gQ80T11 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ush1gQ80T11 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Ush1gQ80T11 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ush1gQ80T11 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ush1gQ80T11 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Ush1gQ80T11 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ush1gQ80T11 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.18■■□□□ 1.46
Ush1gQ80T11 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ush1gQ80T11 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ush1gQ80T11 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.17■■□□□ 1.46
Ush1gQ80T11 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.17■■□□□ 1.46
Ush1gQ80T11 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ush1gQ80T11 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ush1gQ80T11 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.16■■□□□ 1.46
Ush1gQ80T11 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ush1gQ80T11 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Ush1gQ80T11 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ush1gQ80T11 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Gm14117-201ENSMUST00000122417 843 ntBASIC24.15■■□□□ 1.46
Ush1gQ80T11 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ush1gQ80T11 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ush1gQ80T11 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ush1gQ80T11 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ush1gQ80T11 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ush1gQ80T11 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.14■■□□□ 1.45
Ush1gQ80T11 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Ush1gQ80T11 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ush1gQ80T11 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ush1gQ80T11 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ush1gQ80T11 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.13■■□□□ 1.45
Ush1gQ80T11 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ush1gQ80T11 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.11■■□□□ 1.45
Ush1gQ80T11 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ush1gQ80T11 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ush1gQ80T11 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.1■■□□□ 1.45
Ush1gQ80T11 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ush1gQ80T11 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ush1gQ80T11 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ush1gQ80T11 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.09■■□□□ 1.45
Ush1gQ80T11 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ush1gQ80T11 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.09■■□□□ 1.45
Ush1gQ80T11 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ush1gQ80T11 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ush1gQ80T11 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.08■■□□□ 1.45
Ush1gQ80T11 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ush1gQ80T11 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ush1gQ80T11 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Ush1gQ80T11 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ush1gQ80T11 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.07■■□□□ 1.44
Ush1gQ80T11 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms