Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Timd4Q6U7R4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Timd4Q6U7R4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.59■□□□□ 0.89
Timd4Q6U7R4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.59■□□□□ 0.89
Timd4Q6U7R4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Timd4Q6U7R4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Timd4Q6U7R4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Timd4Q6U7R4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Timd4Q6U7R4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Timd4Q6U7R4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Timd4Q6U7R4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Timd4Q6U7R4 Gm7332-201ENSMUST00000118351 454 ntBASIC20.57■□□□□ 0.88
Timd4Q6U7R4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timd4Q6U7R4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timd4Q6U7R4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Timd4Q6U7R4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timd4Q6U7R4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Timd4Q6U7R4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.53■□□□□ 0.88
Timd4Q6U7R4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Timd4Q6U7R4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Timd4Q6U7R4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Timd4Q6U7R4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Timd4Q6U7R4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Timd4Q6U7R4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Timd4Q6U7R4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.51■□□□□ 0.87
Timd4Q6U7R4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Timd4Q6U7R4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Timd4Q6U7R4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Timd4Q6U7R4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Timd4Q6U7R4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Timd4Q6U7R4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Timd4Q6U7R4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Timd4Q6U7R4 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.48■□□□□ 0.87
Timd4Q6U7R4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Timd4Q6U7R4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Timd4Q6U7R4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Timd4Q6U7R4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Timd4Q6U7R4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Timd4Q6U7R4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Timd4Q6U7R4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Timd4Q6U7R4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Timd4Q6U7R4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Timd4Q6U7R4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Timd4Q6U7R4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Timd4Q6U7R4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms