Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.18■□□□□ 0.66
Rif1Q6PR54 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rif1Q6PR54 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rif1Q6PR54 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.17■□□□□ 0.66
Rif1Q6PR54 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rif1Q6PR54 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rif1Q6PR54 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rif1Q6PR54 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rif1Q6PR54 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Rif1Q6PR54 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rif1Q6PR54 Gm26571-201ENSMUST00000181399 666 ntBASIC19.16■□□□□ 0.66
Rif1Q6PR54 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.16■□□□□ 0.66
Rif1Q6PR54 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rif1Q6PR54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rif1Q6PR54 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rif1Q6PR54 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.15■□□□□ 0.66
Rif1Q6PR54 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rif1Q6PR54 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rif1Q6PR54 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rif1Q6PR54 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rif1Q6PR54 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.14■□□□□ 0.65
Rif1Q6PR54 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.13■□□□□ 0.65
Rif1Q6PR54 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
Rif1Q6PR54 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.13■□□□□ 0.65
Rif1Q6PR54 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.13■□□□□ 0.65
Rif1Q6PR54 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rif1Q6PR54 Spcs1-204ENSMUST00000226782 949 ntBASIC19.13■□□□□ 0.65
Rif1Q6PR54 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rif1Q6PR54 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.12■□□□□ 0.65
Rif1Q6PR54 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rif1Q6PR54 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.12■□□□□ 0.65
Rif1Q6PR54 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rif1Q6PR54 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rif1Q6PR54 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.12■□□□□ 0.65
Rif1Q6PR54 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rif1Q6PR54 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rif1Q6PR54 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.11■□□□□ 0.65
Rif1Q6PR54 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Rif1Q6PR54 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.11■□□□□ 0.65
Rif1Q6PR54 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rif1Q6PR54 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.1■□□□□ 0.65
Rif1Q6PR54 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.1■□□□□ 0.65
Rif1Q6PR54 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.1■□□□□ 0.65
Rif1Q6PR54 Gm27405-201ENSMUST00000184201 112 ntBASIC19.1■□□□□ 0.65
Rif1Q6PR54 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rif1Q6PR54 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.1■□□□□ 0.65
Rif1Q6PR54 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rif1Q6PR54 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rif1Q6PR54 Gm7291-201ENSMUST00000199147 382 ntBASIC19.09■□□□□ 0.65
Rif1Q6PR54 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rif1Q6PR54 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rif1Q6PR54 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rif1Q6PR54 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rif1Q6PR54 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rif1Q6PR54 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.07■□□□□ 0.64
Rif1Q6PR54 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rif1Q6PR54 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rif1Q6PR54 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.06■□□□□ 0.64
Rif1Q6PR54 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rif1Q6PR54 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rif1Q6PR54 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rif1Q6PR54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rif1Q6PR54 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rif1Q6PR54 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rif1Q6PR54 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.05■□□□□ 0.64
Rif1Q6PR54 Gm6139-201ENSMUST00000079261 882 ntBASIC19.05■□□□□ 0.64
Rif1Q6PR54 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rif1Q6PR54 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rif1Q6PR54 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rif1Q6PR54 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rif1Q6PR54 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rif1Q6PR54 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rif1Q6PR54 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rif1Q6PR54 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rif1Q6PR54 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rif1Q6PR54 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.01■□□□□ 0.63
Rif1Q6PR54 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.01■□□□□ 0.63
Rif1Q6PR54 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rif1Q6PR54 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Rif1Q6PR54 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rif1Q6PR54 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19■□□□□ 0.63
Rif1Q6PR54 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rif1Q6PR54 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19■□□□□ 0.63
Rif1Q6PR54 AC117769.4-201ENSMUST00000225679 685 ntBASIC19■□□□□ 0.63
Rif1Q6PR54 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rif1Q6PR54 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rif1Q6PR54 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rif1Q6PR54 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rif1Q6PR54 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rif1Q6PR54 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Rif1Q6PR54 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms