Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim45Q6PFY8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Trim45Q6PFY8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim45Q6PFY8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.77■□□□□ 0.92
Trim45Q6PFY8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim45Q6PFY8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim45Q6PFY8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim45Q6PFY8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Trim45Q6PFY8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim45Q6PFY8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim45Q6PFY8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.74■□□□□ 0.91
Trim45Q6PFY8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim45Q6PFY8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim45Q6PFY8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim45Q6PFY8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim45Q6PFY8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim45Q6PFY8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim45Q6PFY8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim45Q6PFY8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim45Q6PFY8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim45Q6PFY8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.71■□□□□ 0.91
Trim45Q6PFY8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim45Q6PFY8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim45Q6PFY8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim45Q6PFY8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trim45Q6PFY8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim45Q6PFY8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim45Q6PFY8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim45Q6PFY8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim45Q6PFY8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim45Q6PFY8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim45Q6PFY8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim45Q6PFY8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim45Q6PFY8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim45Q6PFY8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim45Q6PFY8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim45Q6PFY8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim45Q6PFY8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim45Q6PFY8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim45Q6PFY8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim45Q6PFY8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim45Q6PFY8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim45Q6PFY8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms