Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc3Q64519 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc3Q64519 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc3Q64519 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc3Q64519 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.15■□□□□ 0.98
Sdc3Q64519 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sdc3Q64519 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Sdc3Q64519 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.14■□□□□ 0.97
Sdc3Q64519 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc3Q64519 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc3Q64519 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sdc3Q64519 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc3Q64519 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.13■□□□□ 0.97
Sdc3Q64519 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc3Q64519 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc3Q64519 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc3Q64519 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sdc3Q64519 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sdc3Q64519 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc3Q64519 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc3Q64519 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sdc3Q64519 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sdc3Q64519 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sdc3Q64519 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sdc3Q64519 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sdc3Q64519 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sdc3Q64519 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sdc3Q64519 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc3Q64519 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc3Q64519 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc3Q64519 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sdc3Q64519 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sdc3Q64519 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sdc3Q64519 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sdc3Q64519 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sdc3Q64519 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.09■□□□□ 0.97
Sdc3Q64519 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.08■□□□□ 0.97
Sdc3Q64519 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.08■□□□□ 0.97
Sdc3Q64519 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.08■□□□□ 0.96
Sdc3Q64519 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Sdc3Q64519 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc3Q64519 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sdc3Q64519 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sdc3Q64519 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.06■□□□□ 0.96
Sdc3Q64519 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc3Q64519 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc3Q64519 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc3Q64519 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc3Q64519 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc3Q64519 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc3Q64519 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc3Q64519 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc3Q64519 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc3Q64519 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Sdc3Q64519 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Sdc3Q64519 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.03■□□□□ 0.96
Sdc3Q64519 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc3Q64519 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc3Q64519 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc3Q64519 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc3Q64519 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Sdc3Q64519 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc3Q64519 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc3Q64519 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc3Q64519 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc3Q64519 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc3Q64519 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc3Q64519 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sdc3Q64519 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sdc3Q64519 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc3Q64519 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc3Q64519 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21■□□□□ 0.95
Sdc3Q64519 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21■□□□□ 0.95
Sdc3Q64519 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc3Q64519 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc3Q64519 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc3Q64519 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.99■□□□□ 0.95
Sdc3Q64519 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.99■□□□□ 0.95
Sdc3Q64519 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc3Q64519 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc3Q64519 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc3Q64519 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc3Q64519 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.97■□□□□ 0.95
Sdc3Q64519 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc3Q64519 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc3Q64519 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc3Q64519 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc3Q64519 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms