Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six3Q62233 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.61■■□□□ 1.05
Six3Q62233 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Six3Q62233 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.61■■□□□ 1.05
Six3Q62233 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six3Q62233 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Six3Q62233 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Six3Q62233 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Six3Q62233 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six3Q62233 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six3Q62233 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six3Q62233 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six3Q62233 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six3Q62233 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Six3Q62233 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Six3Q62233 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.58■■□□□ 1.05
Six3Q62233 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Six3Q62233 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Six3Q62233 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.58■■□□□ 1.05
Six3Q62233 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.58■■□□□ 1.05
Six3Q62233 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.57■■□□□ 1.04
Six3Q62233 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Six3Q62233 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six3Q62233 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Six3Q62233 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Six3Q62233 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.56■■□□□ 1.04
Six3Q62233 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Six3Q62233 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Six3Q62233 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.56■■□□□ 1.04
Six3Q62233 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Six3Q62233 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six3Q62233 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six3Q62233 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six3Q62233 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six3Q62233 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Six3Q62233 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Six3Q62233 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Six3Q62233 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.53■■□□□ 1.04
Six3Q62233 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Six3Q62233 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Six3Q62233 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Six3Q62233 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Six3Q62233 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Six3Q62233 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Six3Q62233 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.49■■□□□ 1.03
Six3Q62233 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.49■■□□□ 1.03
Six3Q62233 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.49■■□□□ 1.03
Six3Q62233 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.49■■□□□ 1.03
Six3Q62233 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Six3Q62233 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Six3Q62233 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Six3Q62233 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.48■■□□□ 1.03
Six3Q62233 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Six3Q62233 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Six3Q62233 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Six3Q62233 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Six3Q62233 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.47■■□□□ 1.03
Six3Q62233 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Six3Q62233 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Six3Q62233 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Six3Q62233 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Six3Q62233 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six3Q62233 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six3Q62233 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.46■■□□□ 1.03
Six3Q62233 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Six3Q62233 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.45■■□□□ 1.02
Six3Q62233 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Six3Q62233 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.45■■□□□ 1.02
Six3Q62233 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Six3Q62233 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.44■■□□□ 1.02
Six3Q62233 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Six3Q62233 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Six3Q62233 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.44■■□□□ 1.02
Six3Q62233 Gm6311-201ENSMUST00000073790 878 ntBASIC21.44■■□□□ 1.02
Six3Q62233 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Six3Q62233 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Six3Q62233 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Six3Q62233 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.43■■□□□ 1.02
Six3Q62233 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms