Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn4Q61418 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn4Q61418 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Clcn4Q61418 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn4Q61418 Mir3960-201ENSMUST00000198213 73 ntBASIC20.19■□□□□ 0.82
Clcn4Q61418 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn4Q61418 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn4Q61418 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.18■□□□□ 0.82
Clcn4Q61418 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clcn4Q61418 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.18■□□□□ 0.82
Clcn4Q61418 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn4Q61418 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn4Q61418 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Clcn4Q61418 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clcn4Q61418 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clcn4Q61418 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn4Q61418 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn4Q61418 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn4Q61418 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcn4Q61418 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn4Q61418 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn4Q61418 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn4Q61418 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.15■□□□□ 0.82
Clcn4Q61418 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn4Q61418 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn4Q61418 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn4Q61418 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clcn4Q61418 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Clcn4Q61418 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn4Q61418 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn4Q61418 Cap2-205ENSMUST00000225824 1634 ntBASIC20.14■□□□□ 0.81
Clcn4Q61418 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn4Q61418 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn4Q61418 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
Clcn4Q61418 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn4Q61418 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.12■□□□□ 0.81
Clcn4Q61418 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.12■□□□□ 0.81
Clcn4Q61418 Gm9812-201ENSMUST00000061934 968 ntBASIC20.12■□□□□ 0.81
Clcn4Q61418 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn4Q61418 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn4Q61418 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.11■□□□□ 0.81
Clcn4Q61418 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.11■□□□□ 0.81
Clcn4Q61418 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clcn4Q61418 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn4Q61418 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn4Q61418 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn4Q61418 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Gm11687-201ENSMUST00000118911 886 ntBASIC20.1■□□□□ 0.81
Clcn4Q61418 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Clcn4Q61418 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.1■□□□□ 0.81
Clcn4Q61418 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn4Q61418 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcn4Q61418 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcn4Q61418 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn4Q61418 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.09■□□□□ 0.81
Clcn4Q61418 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Clcn4Q61418 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn4Q61418 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.09■□□□□ 0.81
Clcn4Q61418 Scarna2-201ENSMUST00000157560 414 ntBASIC20.09■□□□□ 0.81
Clcn4Q61418 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.09■□□□□ 0.81
Clcn4Q61418 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Clcn4Q61418 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn4Q61418 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Clcn4Q61418 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn4Q61418 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Clcn4Q61418 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn4Q61418 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn4Q61418 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.08■□□□□ 0.81
Clcn4Q61418 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn4Q61418 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn4Q61418 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn4Q61418 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn4Q61418 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Clcn4Q61418 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Clcn4Q61418 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn4Q61418 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn4Q61418 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Clcn4Q61418 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.07■□□□□ 0.8
Clcn4Q61418 Gm45364-201ENSMUST00000210883 159 ntBASIC20.07■□□□□ 0.8
Clcn4Q61418 Gm9806-201ENSMUST00000051080 552 ntBASIC20.07■□□□□ 0.8
Clcn4Q61418 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn4Q61418 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn4Q61418 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn4Q61418 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 329.9 ms