Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ptch1Q61115 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC33.15■■■□□ 2.9
Ptch1Q61115 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ptch1Q61115 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ptch1Q61115 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC33.14■■■□□ 2.9
Ptch1Q61115 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ptch1Q61115 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ptch1Q61115 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC33.13■■■□□ 2.89
Ptch1Q61115 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Ptch1Q61115 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Ptch1Q61115 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ptch1Q61115 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ptch1Q61115 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ptch1Q61115 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ptch1Q61115 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ptch1Q61115 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ptch1Q61115 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ptch1Q61115 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ptch1Q61115 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC33.11■■■□□ 2.89
Ptch1Q61115 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ptch1Q61115 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ptch1Q61115 Gm16464-201ENSMUST00000117815 1095 ntBASIC33.1■■■□□ 2.89
Ptch1Q61115 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
Ptch1Q61115 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ptch1Q61115 Gm7417-201ENSMUST00000192950 473 ntBASIC33.09■■■□□ 2.89
Ptch1Q61115 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC33.08■■■□□ 2.89
Ptch1Q61115 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
Ptch1Q61115 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ptch1Q61115 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
Ptch1Q61115 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC33.06■■■□□ 2.88
Ptch1Q61115 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC33.06■■■□□ 2.88
Ptch1Q61115 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ptch1Q61115 Gm9847-201ENSMUST00000052528 599 ntBASIC33.05■■■□□ 2.88
Ptch1Q61115 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ptch1Q61115 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ptch1Q61115 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Ptch1Q61115 Gm5297-201ENSMUST00000198555 1171 ntBASIC33.03■■■□□ 2.88
Ptch1Q61115 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC33.03■■■□□ 2.88
Ptch1Q61115 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ptch1Q61115 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Ptch1Q61115 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Ptch1Q61115 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC33.02■■■□□ 2.88
Ptch1Q61115 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ptch1Q61115 Gm22238-201ENSMUST00000175222 88 ntBASIC33.02■■■□□ 2.88
Ptch1Q61115 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC33.02■■■□□ 2.88
Ptch1Q61115 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Ptch1Q61115 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Ptch1Q61115 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Ptch1Q61115 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
Ptch1Q61115 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC33■■■□□ 2.87
Ptch1Q61115 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC33■■■□□ 2.87
Ptch1Q61115 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC33■■■□□ 2.87
Ptch1Q61115 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Ptch1Q61115 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Ptch1Q61115 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC32.99■■■□□ 2.87
Ptch1Q61115 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Ptch1Q61115 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.98■■■□□ 2.87
Ptch1Q61115 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ptch1Q61115 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ptch1Q61115 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ptch1Q61115 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ptch1Q61115 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ptch1Q61115 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.95■■■□□ 2.87
Ptch1Q61115 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC32.95■■■□□ 2.87
Ptch1Q61115 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.95■■■□□ 2.87
Ptch1Q61115 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC32.95■■■□□ 2.87
Ptch1Q61115 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Ptch1Q61115 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Ptch1Q61115 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
Ptch1Q61115 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC32.94■■■□□ 2.86
Ptch1Q61115 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
Ptch1Q61115 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ptch1Q61115 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ptch1Q61115 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Ptch1Q61115 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
Ptch1Q61115 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ptch1Q61115 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC32.92■■■□□ 2.86
Ptch1Q61115 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Ptch1Q61115 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ptch1Q61115 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ptch1Q61115 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.89■■■□□ 2.86
Ptch1Q61115 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Ptch1Q61115 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.89■■■□□ 2.86
Ptch1Q61115 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC32.89■■■□□ 2.85
Ptch1Q61115 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ptch1Q61115 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.88■■■□□ 2.85
Ptch1Q61115 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.88■■■□□ 2.85
Ptch1Q61115 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ptch1Q61115 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ptch1Q61115 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.87■■■□□ 2.85
Ptch1Q61115 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
Ptch1Q61115 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Ptch1Q61115 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC32.86■■■□□ 2.85
Ptch1Q61115 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC32.86■■■□□ 2.85
Ptch1Q61115 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Ptch1Q61115 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC32.85■■■□□ 2.85
Ptch1Q61115 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.83■■■□□ 2.85
Ptch1Q61115 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ptch1Q61115 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ptch1Q61115 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms