Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Sdf4Q61112 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.39■■□□□ 1.17
Sdf4Q61112 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sdf4Q61112 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.38■■□□□ 1.17
Sdf4Q61112 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.38■■□□□ 1.17
Sdf4Q61112 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sdf4Q61112 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
Sdf4Q61112 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sdf4Q61112 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sdf4Q61112 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Sdf4Q61112 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Sdf4Q61112 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.34■■□□□ 1.17
Sdf4Q61112 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sdf4Q61112 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sdf4Q61112 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.32■■□□□ 1.16
Sdf4Q61112 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Sdf4Q61112 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.31■■□□□ 1.16
Sdf4Q61112 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sdf4Q61112 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.3■■□□□ 1.16
Sdf4Q61112 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Sdf4Q61112 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Sdf4Q61112 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.29■■□□□ 1.16
Sdf4Q61112 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Sdf4Q61112 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Gm27502-201ENSMUST00000183495 199 ntBASIC22.26■■□□□ 1.15
Sdf4Q61112 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
Sdf4Q61112 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Sdf4Q61112 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.25■■□□□ 1.15
Sdf4Q61112 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Gm14523-201ENSMUST00000117260 558 ntBASIC22.24■■□□□ 1.15
Sdf4Q61112 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Sdf4Q61112 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sdf4Q61112 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sdf4Q61112 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Sdf4Q61112 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.23■■□□□ 1.15
Sdf4Q61112 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sdf4Q61112 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sdf4Q61112 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Sdf4Q61112 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sdf4Q61112 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
Sdf4Q61112 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.2■■□□□ 1.14
Sdf4Q61112 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms