Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ripk1Q60855 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ripk1Q60855 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ripk1Q60855 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ripk1Q60855 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ripk1Q60855 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Ripk1Q60855 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ripk1Q60855 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ripk1Q60855 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ripk1Q60855 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ripk1Q60855 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.75■□□□□ 0.91
Ripk1Q60855 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.75■□□□□ 0.91
Ripk1Q60855 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ripk1Q60855 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ripk1Q60855 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Ripk1Q60855 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ripk1Q60855 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ripk1Q60855 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ripk1Q60855 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ripk1Q60855 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ripk1Q60855 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ripk1Q60855 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ripk1Q60855 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ripk1Q60855 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ripk1Q60855 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ripk1Q60855 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ripk1Q60855 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ripk1Q60855 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ripk1Q60855 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ripk1Q60855 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ripk1Q60855 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ripk1Q60855 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ripk1Q60855 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ripk1Q60855 Scarna2-201ENSMUST00000157560 414 ntBASIC20.71■□□□□ 0.91
Ripk1Q60855 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ripk1Q60855 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.71■□□□□ 0.91
Ripk1Q60855 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ripk1Q60855 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
Ripk1Q60855 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.71■□□□□ 0.91
Ripk1Q60855 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ripk1Q60855 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ripk1Q60855 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ripk1Q60855 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ripk1Q60855 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.7■□□□□ 0.9
Ripk1Q60855 Gm9806-201ENSMUST00000051080 552 ntBASIC20.7■□□□□ 0.9
Ripk1Q60855 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ripk1Q60855 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ripk1Q60855 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.69■□□□□ 0.9
Ripk1Q60855 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.69■□□□□ 0.9
Ripk1Q60855 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ripk1Q60855 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.69■□□□□ 0.9
Ripk1Q60855 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ripk1Q60855 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Ripk1Q60855 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ripk1Q60855 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.69■□□□□ 0.9
Ripk1Q60855 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Ripk1Q60855 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ripk1Q60855 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ripk1Q60855 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ripk1Q60855 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ripk1Q60855 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ripk1Q60855 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ripk1Q60855 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ripk1Q60855 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.66■□□□□ 0.9
Ripk1Q60855 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ripk1Q60855 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ripk1Q60855 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ripk1Q60855 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.65■□□□□ 0.9
Ripk1Q60855 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.65■□□□□ 0.9
Ripk1Q60855 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Ripk1Q60855 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ripk1Q60855 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ripk1Q60855 Gm16437-201ENSMUST00000025669 507 ntBASIC20.65■□□□□ 0.9
Ripk1Q60855 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ripk1Q60855 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ripk1Q60855 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ripk1Q60855 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ripk1Q60855 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ripk1Q60855 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ripk1Q60855 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ripk1Q60855 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ripk1Q60855 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ripk1Q60855 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ripk1Q60855 Gm11687-201ENSMUST00000118911 886 ntBASIC20.63■□□□□ 0.89
Ripk1Q60855 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ripk1Q60855 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ripk1Q60855 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ripk1Q60855 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms