Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col12a1Q60847 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.63■■□□□ 1.21
Col12a1Q60847 Gm7417-201ENSMUST00000192950 473 ntBASIC22.63■■□□□ 1.21
Col12a1Q60847 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Col12a1Q60847 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col12a1Q60847 Gm12922-201ENSMUST00000120626 809 ntBASIC22.62■■□□□ 1.21
Col12a1Q60847 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col12a1Q60847 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.62■■□□□ 1.21
Col12a1Q60847 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col12a1Q60847 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.61■■□□□ 1.21
Col12a1Q60847 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.61■■□□□ 1.21
Col12a1Q60847 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.61■■□□□ 1.21
Col12a1Q60847 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Col12a1Q60847 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col12a1Q60847 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.6■■□□□ 1.21
Col12a1Q60847 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col12a1Q60847 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col12a1Q60847 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col12a1Q60847 Gm29257-201ENSMUST00000186115 639 ntBASIC22.6■■□□□ 1.21
Col12a1Q60847 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Col12a1Q60847 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col12a1Q60847 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col12a1Q60847 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col12a1Q60847 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Col12a1Q60847 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col12a1Q60847 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col12a1Q60847 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col12a1Q60847 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col12a1Q60847 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col12a1Q60847 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col12a1Q60847 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.56■■□□□ 1.2
Col12a1Q60847 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col12a1Q60847 Zxda-201ENSMUST00000117281 2621 ntBASIC22.56■■□□□ 1.2
Col12a1Q60847 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.55■■□□□ 1.2
Col12a1Q60847 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col12a1Q60847 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col12a1Q60847 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col12a1Q60847 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.55■■□□□ 1.2
Col12a1Q60847 Gm22238-201ENSMUST00000175222 88 ntBASIC22.54■■□□□ 1.2
Col12a1Q60847 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col12a1Q60847 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 Gm12821-201ENSMUST00000120022 600 ntBASIC22.53■■□□□ 1.2
Col12a1Q60847 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.53■■□□□ 1.2
Col12a1Q60847 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.53■■□□□ 1.2
Col12a1Q60847 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col12a1Q60847 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.52■■□□□ 1.2
Col12a1Q60847 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.52■■□□□ 1.2
Col12a1Q60847 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.52■■□□□ 1.2
Col12a1Q60847 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col12a1Q60847 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.51■■□□□ 1.19
Col12a1Q60847 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col12a1Q60847 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Col12a1Q60847 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Col12a1Q60847 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col12a1Q60847 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Col12a1Q60847 Gm8495-201ENSMUST00000188740 694 ntBASIC22.51■■□□□ 1.19
Col12a1Q60847 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col12a1Q60847 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.5■■□□□ 1.19
Col12a1Q60847 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col12a1Q60847 Amer2-203ENSMUST00000225247 2662 ntBASIC22.5■■□□□ 1.19
Col12a1Q60847 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col12a1Q60847 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col12a1Q60847 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Col12a1Q60847 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col12a1Q60847 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.49■■□□□ 1.19
Col12a1Q60847 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Col12a1Q60847 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.49■■□□□ 1.19
Col12a1Q60847 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.49■■□□□ 1.19
Col12a1Q60847 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col12a1Q60847 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.47■■□□□ 1.19
Col12a1Q60847 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col12a1Q60847 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col12a1Q60847 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col12a1Q60847 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.46■■□□□ 1.19
Col12a1Q60847 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.46■■□□□ 1.19
Col12a1Q60847 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.46■■□□□ 1.19
Col12a1Q60847 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Col12a1Q60847 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Col12a1Q60847 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.46■■□□□ 1.19
Col12a1Q60847 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Col12a1Q60847 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col12a1Q60847 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col12a1Q60847 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col12a1Q60847 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col12a1Q60847 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col12a1Q60847 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col12a1Q60847 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col12a1Q60847 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Col12a1Q60847 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Col12a1Q60847 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col12a1Q60847 Gm45417-201ENSMUST00000209533 758 ntBASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms