Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Gm11687-201ENSMUST00000118911 886 ntBASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Gm44428-201ENSMUST00000204474 874 ntBASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf20Q5DTM8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf20Q5DTM8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf20Q5DTM8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf20Q5DTM8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf20Q5DTM8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf20Q5DTM8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rnf20Q5DTM8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.29■■□□□ 1.8
Rnf20Q5DTM8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Rnf20Q5DTM8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.29■■□□□ 1.8
Rnf20Q5DTM8 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.29■■□□□ 1.8
Rnf20Q5DTM8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf20Q5DTM8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf20Q5DTM8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf20Q5DTM8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Rnf20Q5DTM8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Rnf20Q5DTM8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf20Q5DTM8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf20Q5DTM8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf20Q5DTM8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf20Q5DTM8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Rnf20Q5DTM8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf20Q5DTM8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.25■■□□□ 1.79
Rnf20Q5DTM8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf20Q5DTM8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Rnf20Q5DTM8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Rnf20Q5DTM8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf20Q5DTM8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Rnf20Q5DTM8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf20Q5DTM8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.22■■□□□ 1.79
Rnf20Q5DTM8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.22■■□□□ 1.79
Rnf20Q5DTM8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rnf20Q5DTM8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Rnf20Q5DTM8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rnf20Q5DTM8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.2■■□□□ 1.78
Rnf20Q5DTM8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf20Q5DTM8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf20Q5DTM8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rnf20Q5DTM8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rnf20Q5DTM8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rnf20Q5DTM8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rnf20Q5DTM8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rnf20Q5DTM8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Rnf20Q5DTM8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rnf20Q5DTM8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rnf20Q5DTM8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.17■■□□□ 1.78
Rnf20Q5DTM8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf20Q5DTM8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.16■■□□□ 1.78
Rnf20Q5DTM8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf20Q5DTM8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf20Q5DTM8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf20Q5DTM8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf20Q5DTM8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf20Q5DTM8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.15■■□□□ 1.78
Rnf20Q5DTM8 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.15■■□□□ 1.78
Rnf20Q5DTM8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rnf20Q5DTM8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rnf20Q5DTM8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rnf20Q5DTM8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rnf20Q5DTM8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.13■■□□□ 1.77
Rnf20Q5DTM8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rnf20Q5DTM8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Rnf20Q5DTM8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rnf20Q5DTM8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Rnf20Q5DTM8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf20Q5DTM8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf20Q5DTM8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf20Q5DTM8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf20Q5DTM8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf20Q5DTM8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rnf20Q5DTM8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rnf20Q5DTM8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rnf20Q5DTM8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.09■■□□□ 1.77
Rnf20Q5DTM8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rnf20Q5DTM8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Rnf20Q5DTM8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Rnf20Q5DTM8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.08■■□□□ 1.77
Rnf20Q5DTM8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rnf20Q5DTM8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rnf20Q5DTM8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rnf20Q5DTM8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rnf20Q5DTM8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rnf20Q5DTM8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms