Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Urb1Q571H0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Urb1Q571H0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Urb1Q571H0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.41■□□□□ 0.86
Urb1Q571H0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.41■□□□□ 0.86
Urb1Q571H0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.41■□□□□ 0.86
Urb1Q571H0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Etf1-202ENSMUST00000180351 108 ntBASIC20.41■□□□□ 0.86
Urb1Q571H0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Urb1Q571H0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Urb1Q571H0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Urb1Q571H0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Urb1Q571H0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Urb1Q571H0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Urb1Q571H0 Gm21956-201ENSMUST00000179946 522 ntBASIC20.39■□□□□ 0.86
Urb1Q571H0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Urb1Q571H0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.39■□□□□ 0.85
Urb1Q571H0 Serp2-204ENSMUST00000228055 705 ntBASIC20.39■□□□□ 0.85
Urb1Q571H0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.39■□□□□ 0.85
Urb1Q571H0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Urb1Q571H0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.38■□□□□ 0.85
Urb1Q571H0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Urb1Q571H0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Urb1Q571H0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Urb1Q571H0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.38■□□□□ 0.85
Urb1Q571H0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Urb1Q571H0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Urb1Q571H0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Urb1Q571H0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.36■□□□□ 0.85
Urb1Q571H0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.36■□□□□ 0.85
Urb1Q571H0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Urb1Q571H0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Urb1Q571H0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Urb1Q571H0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Urb1Q571H0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Urb1Q571H0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.35■□□□□ 0.85
Urb1Q571H0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Urb1Q571H0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.35■□□□□ 0.85
Urb1Q571H0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Urb1Q571H0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Urb1Q571H0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Urb1Q571H0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Urb1Q571H0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Urb1Q571H0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Urb1Q571H0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Urb1Q571H0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Urb1Q571H0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Urb1Q571H0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Urb1Q571H0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Urb1Q571H0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Urb1Q571H0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Urb1Q571H0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Urb1Q571H0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.32■□□□□ 0.84
Urb1Q571H0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Urb1Q571H0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Urb1Q571H0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Urb1Q571H0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Urb1Q571H0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Urb1Q571H0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.31■□□□□ 0.84
Urb1Q571H0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
Urb1Q571H0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Urb1Q571H0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Urb1Q571H0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Urb1Q571H0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Urb1Q571H0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Urb1Q571H0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.3■□□□□ 0.84
Urb1Q571H0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Urb1Q571H0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Urb1Q571H0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Urb1Q571H0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Urb1Q571H0 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.29■□□□□ 0.84
Urb1Q571H0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Urb1Q571H0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Urb1Q571H0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Urb1Q571H0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Urb1Q571H0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Urb1Q571H0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.27■□□□□ 0.84
Urb1Q571H0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Urb1Q571H0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Urb1Q571H0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.27■□□□□ 0.84
Urb1Q571H0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Urb1Q571H0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Urb1Q571H0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Urb1Q571H0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Urb1Q571H0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Urb1Q571H0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.26■□□□□ 0.83
Urb1Q571H0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms