Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC40.43■■■■■ 4.06
Pds5bQ4VA53 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Pds5bQ4VA53 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Pds5bQ4VA53 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
Pds5bQ4VA53 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC40.42■■■■■ 4.06
Pds5bQ4VA53 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC40.42■■■■■ 4.06
Pds5bQ4VA53 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC40.41■■■■■ 4.06
Pds5bQ4VA53 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC40.41■■■■■ 4.06
Pds5bQ4VA53 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC40.41■■■■■ 4.06
Pds5bQ4VA53 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
Pds5bQ4VA53 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC40.39■■■■■ 4.06
Pds5bQ4VA53 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC40.38■■■■■ 4.05
Pds5bQ4VA53 Gm27454-201ENSMUST00000185090 204 ntBASIC40.38■■■■■ 4.05
Pds5bQ4VA53 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
Pds5bQ4VA53 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC40.38■■■■■ 4.05
Pds5bQ4VA53 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
Pds5bQ4VA53 Gm12821-201ENSMUST00000120022 600 ntBASIC40.37■■■■■ 4.05
Pds5bQ4VA53 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
Pds5bQ4VA53 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC40.37■■■■■ 4.05
Pds5bQ4VA53 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Pds5bQ4VA53 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC40.36■■■■■ 4.05
Pds5bQ4VA53 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC40.35■■■■■ 4.05
Pds5bQ4VA53 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC40.34■■■■■ 4.05
Pds5bQ4VA53 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC40.34■■■■■ 4.05
Pds5bQ4VA53 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Pds5bQ4VA53 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC40.32■■■■■ 4.05
Pds5bQ4VA53 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
Pds5bQ4VA53 AC140930.3-201ENSMUST00000222935 274 ntBASIC40.32■■■■■ 4.04
Pds5bQ4VA53 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
Pds5bQ4VA53 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
Pds5bQ4VA53 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC40.3■■■■■ 4.04
Pds5bQ4VA53 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Pds5bQ4VA53 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
Pds5bQ4VA53 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
Pds5bQ4VA53 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC40.28■■■■■ 4.04
Pds5bQ4VA53 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Pds5bQ4VA53 Gm45417-201ENSMUST00000209533 758 ntBASIC40.26■■■■■ 4.04
Pds5bQ4VA53 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC40.25■■■■■ 4.03
Pds5bQ4VA53 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Pds5bQ4VA53 Gm40881-201ENSMUST00000223397 166 ntBASIC40.25■■■■■ 4.03
Pds5bQ4VA53 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
Pds5bQ4VA53 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC40.24■■■■■ 4.03
Pds5bQ4VA53 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC40.24■■■■■ 4.03
Pds5bQ4VA53 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC40.24■■■■■ 4.03
Pds5bQ4VA53 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Pds5bQ4VA53 Gm8495-201ENSMUST00000188740 694 ntBASIC40.23■■■■■ 4.03
Pds5bQ4VA53 Flvcr1-202ENSMUST00000191946 1216 ntBASIC40.23■■■■■ 4.03
Pds5bQ4VA53 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC40.22■■■■■ 4.03
Pds5bQ4VA53 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC40.22■■■■■ 4.03
Pds5bQ4VA53 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Pds5bQ4VA53 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC40.2■■■■■ 4.03
Pds5bQ4VA53 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC40.2■■■■■ 4.03
Pds5bQ4VA53 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Pds5bQ4VA53 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
Pds5bQ4VA53 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC40.18■■■■■ 4.02
Pds5bQ4VA53 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
Pds5bQ4VA53 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Pds5bQ4VA53 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC40.17■■■■■ 4.02
Pds5bQ4VA53 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC40.16■■■■■ 4.02
Pds5bQ4VA53 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Pds5bQ4VA53 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC40.16■■■■■ 4.02
Pds5bQ4VA53 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC40.14■■■■■ 4.02
Pds5bQ4VA53 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC40.14■■■■■ 4.02
Pds5bQ4VA53 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC40.14■■■■■ 4.02
Pds5bQ4VA53 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC40.13■■■■■ 4.01
Pds5bQ4VA53 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
Pds5bQ4VA53 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC40.13■■■■■ 4.01
Pds5bQ4VA53 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
Pds5bQ4VA53 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC40.12■■■■■ 4.01
Pds5bQ4VA53 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC40.12■■■■■ 4.01
Pds5bQ4VA53 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC40.12■■■■■ 4.01
Pds5bQ4VA53 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
Pds5bQ4VA53 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC40.11■■■■■ 4.01
Pds5bQ4VA53 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
Pds5bQ4VA53 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
Pds5bQ4VA53 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC40.1■■■■■ 4.01
Pds5bQ4VA53 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC40.1■■■■■ 4.01
Pds5bQ4VA53 Gm18284-201ENSMUST00000172604 624 ntBASIC40.09■■■■■ 4.01
Pds5bQ4VA53 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC40.09■■■■■ 4.01
Pds5bQ4VA53 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Pds5bQ4VA53 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Pds5bQ4VA53 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Pds5bQ4VA53 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
Pds5bQ4VA53 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC40.08■■■■■ 4.01
Pds5bQ4VA53 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC40.08■■■■■ 4.01
Pds5bQ4VA53 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
Pds5bQ4VA53 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4.01
Pds5bQ4VA53 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Pds5bQ4VA53 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC40.07■■■■■ 4
Pds5bQ4VA53 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC40.07■■■■■ 4
Pds5bQ4VA53 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Pds5bQ4VA53 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC40.06■■■■■ 4
Pds5bQ4VA53 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC40.05■■■■■ 4
Pds5bQ4VA53 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC40.05■■■■■ 4
Pds5bQ4VA53 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC40.05■■■■■ 4
Pds5bQ4VA53 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
Pds5bQ4VA53 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC40.04■■■■■ 4
Pds5bQ4VA53 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
Pds5bQ4VA53 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Pds5bQ4VA53 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC40.03■■■■■ 4
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms