Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xirp2Q4U4S6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.22■□□□□ 0.35
Xirp2Q4U4S6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xirp2Q4U4S6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Xirp2Q4U4S6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.19■□□□□ 0.34
Xirp2Q4U4S6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Xirp2Q4U4S6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xirp2Q4U4S6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.17■□□□□ 0.34
Xirp2Q4U4S6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.17■□□□□ 0.34
Xirp2Q4U4S6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xirp2Q4U4S6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.16■□□□□ 0.34
Xirp2Q4U4S6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xirp2Q4U4S6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.14■□□□□ 0.34
Xirp2Q4U4S6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.14■□□□□ 0.34
Xirp2Q4U4S6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Xirp2Q4U4S6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xirp2Q4U4S6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xirp2Q4U4S6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xirp2Q4U4S6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.11■□□□□ 0.33
Xirp2Q4U4S6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xirp2Q4U4S6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Xirp2Q4U4S6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Xirp2Q4U4S6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Xirp2Q4U4S6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms