Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Trpm1Q2TV84 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
Trpm1Q2TV84 Gm21956-201ENSMUST00000179946 522 ntBASIC32.75■■■□□ 2.83
Trpm1Q2TV84 Etf1-202ENSMUST00000180351 108 ntBASIC32.75■■■□□ 2.83
Trpm1Q2TV84 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Trpm1Q2TV84 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Trpm1Q2TV84 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
Trpm1Q2TV84 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Trpm1Q2TV84 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Trpm1Q2TV84 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Trpm1Q2TV84 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.73■■■□□ 2.83
Trpm1Q2TV84 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Trpm1Q2TV84 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Trpm1Q2TV84 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC32.72■■■□□ 2.83
Trpm1Q2TV84 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.72■■■□□ 2.83
Trpm1Q2TV84 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Trpm1Q2TV84 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Trpm1Q2TV84 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Trpm1Q2TV84 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
Trpm1Q2TV84 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC32.7■■■□□ 2.83
Trpm1Q2TV84 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.69■■■□□ 2.82
Trpm1Q2TV84 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Trpm1Q2TV84 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC32.68■■■□□ 2.82
Trpm1Q2TV84 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC32.68■■■□□ 2.82
Trpm1Q2TV84 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Trpm1Q2TV84 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Trpm1Q2TV84 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.67■■■□□ 2.82
Trpm1Q2TV84 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Trpm1Q2TV84 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Trpm1Q2TV84 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Trpm1Q2TV84 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Gm16464-201ENSMUST00000117815 1095 ntBASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Gm13241-201ENSMUST00000094493 780 ntBASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Trpm1Q2TV84 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.64■■■□□ 2.82
Trpm1Q2TV84 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Trpm1Q2TV84 Amer2-203ENSMUST00000225247 2662 ntBASIC32.64■■■□□ 2.82
Trpm1Q2TV84 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Trpm1Q2TV84 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Trpm1Q2TV84 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC32.61■■■□□ 2.81
Trpm1Q2TV84 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC32.61■■■□□ 2.81
Trpm1Q2TV84 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Trpm1Q2TV84 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC32.6■■■□□ 2.81
Trpm1Q2TV84 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC32.58■■■□□ 2.81
Trpm1Q2TV84 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.81
Trpm1Q2TV84 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.57■■■□□ 2.81
Trpm1Q2TV84 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC32.57■■■□□ 2.8
Trpm1Q2TV84 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Trpm1Q2TV84 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Trpm1Q2TV84 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Trpm1Q2TV84 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Trpm1Q2TV84 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Trpm1Q2TV84 Gm22238-201ENSMUST00000175222 88 ntBASIC32.54■■■□□ 2.8
Trpm1Q2TV84 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.53■■■□□ 2.8
Trpm1Q2TV84 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Trpm1Q2TV84 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Trpm1Q2TV84 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Trpm1Q2TV84 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Trpm1Q2TV84 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Trpm1Q2TV84 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC32.49■■■□□ 2.79
Trpm1Q2TV84 Serp2-204ENSMUST00000228055 705 ntBASIC32.49■■■□□ 2.79
Trpm1Q2TV84 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Trpm1Q2TV84 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Trpm1Q2TV84 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Trpm1Q2TV84 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Trpm1Q2TV84 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC32.48■■■□□ 2.79
Trpm1Q2TV84 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
Trpm1Q2TV84 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Trpm1Q2TV84 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC32.47■■■□□ 2.79
Trpm1Q2TV84 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Trpm1Q2TV84 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC32.45■■■□□ 2.79
Trpm1Q2TV84 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Trpm1Q2TV84 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Trpm1Q2TV84 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Trpm1Q2TV84 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Trpm1Q2TV84 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.43■■■□□ 2.78
Trpm1Q2TV84 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC32.43■■■□□ 2.78
Trpm1Q2TV84 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC32.43■■■□□ 2.78
Trpm1Q2TV84 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms