Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.92■□□□□ 0.78
Pkd1l3Q2EG98 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pkd1l3Q2EG98 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pkd1l3Q2EG98 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pkd1l3Q2EG98 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pkd1l3Q2EG98 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pkd1l3Q2EG98 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pkd1l3Q2EG98 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pkd1l3Q2EG98 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pkd1l3Q2EG98 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.9■□□□□ 0.78
Pkd1l3Q2EG98 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pkd1l3Q2EG98 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.89■□□□□ 0.78
Pkd1l3Q2EG98 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.89■□□□□ 0.78
Pkd1l3Q2EG98 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pkd1l3Q2EG98 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Gm45444-201ENSMUST00000211394 898 ntBASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1l3Q2EG98 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Pkd1l3Q2EG98 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Gm22567-201ENSMUST00000175542 342 ntBASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkd1l3Q2EG98 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pkd1l3Q2EG98 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pkd1l3Q2EG98 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pkd1l3Q2EG98 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pkd1l3Q2EG98 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pkd1l3Q2EG98 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pkd1l3Q2EG98 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pkd1l3Q2EG98 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.82■□□□□ 0.76
Pkd1l3Q2EG98 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pkd1l3Q2EG98 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pkd1l3Q2EG98 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pkd1l3Q2EG98 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pkd1l3Q2EG98 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pkd1l3Q2EG98 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pkd1l3Q2EG98 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pkd1l3Q2EG98 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms