Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smn1P97801 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smn1P97801 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.89■□□□□ 0.61
Smn1P97801 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smn1P97801 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.89■□□□□ 0.61
Smn1P97801 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smn1P97801 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smn1P97801 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smn1P97801 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.87■□□□□ 0.61
Smn1P97801 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.87■□□□□ 0.61
Smn1P97801 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smn1P97801 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smn1P97801 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.87■□□□□ 0.61
Smn1P97801 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
Smn1P97801 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smn1P97801 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smn1P97801 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smn1P97801 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smn1P97801 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.85■□□□□ 0.61
Smn1P97801 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smn1P97801 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smn1P97801 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smn1P97801 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smn1P97801 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.85■□□□□ 0.61
Smn1P97801 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smn1P97801 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smn1P97801 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smn1P97801 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Smn1P97801 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smn1P97801 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Smn1P97801 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Smn1P97801 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.83■□□□□ 0.61
Smn1P97801 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smn1P97801 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smn1P97801 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smn1P97801 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smn1P97801 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.83■□□□□ 0.6
Smn1P97801 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smn1P97801 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smn1P97801 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smn1P97801 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smn1P97801 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smn1P97801 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smn1P97801 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smn1P97801 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smn1P97801 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.8■□□□□ 0.6
Smn1P97801 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smn1P97801 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smn1P97801 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smn1P97801 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.8■□□□□ 0.6
Smn1P97801 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smn1P97801 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smn1P97801 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smn1P97801 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Smn1P97801 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smn1P97801 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smn1P97801 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smn1P97801 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smn1P97801 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Smn1P97801 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smn1P97801 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smn1P97801 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smn1P97801 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
Smn1P97801 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smn1P97801 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.77■□□□□ 0.59
Smn1P97801 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smn1P97801 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smn1P97801 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.76■□□□□ 0.59
Smn1P97801 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smn1P97801 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smn1P97801 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smn1P97801 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.76■□□□□ 0.59
Smn1P97801 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smn1P97801 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smn1P97801 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smn1P97801 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smn1P97801 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smn1P97801 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smn1P97801 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smn1P97801 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.74■□□□□ 0.59
Smn1P97801 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smn1P97801 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smn1P97801 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Smn1P97801 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms