Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1aP97357 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.34■□□□□ 0.85
Taf1aP97357 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Taf1aP97357 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.33■□□□□ 0.85
Taf1aP97357 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Taf1aP97357 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Taf1aP97357 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1aP97357 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1aP97357 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1aP97357 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Taf1aP97357 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Taf1aP97357 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.32■□□□□ 0.84
Taf1aP97357 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.32■□□□□ 0.84
Taf1aP97357 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.32■□□□□ 0.84
Taf1aP97357 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1aP97357 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Taf1aP97357 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1aP97357 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.31■□□□□ 0.84
Taf1aP97357 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1aP97357 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Taf1aP97357 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Taf1aP97357 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Taf1aP97357 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.3■□□□□ 0.84
Taf1aP97357 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Taf1aP97357 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Taf1aP97357 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.3■□□□□ 0.84
Taf1aP97357 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Taf1aP97357 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Taf1aP97357 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1aP97357 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.29■□□□□ 0.84
Taf1aP97357 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Taf1aP97357 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1aP97357 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1aP97357 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.28■□□□□ 0.84
Taf1aP97357 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1aP97357 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1aP97357 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.28■□□□□ 0.84
Taf1aP97357 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Taf1aP97357 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1aP97357 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1aP97357 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1aP97357 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1aP97357 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
Taf1aP97357 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Taf1aP97357 Gm4799-201ENSMUST00000095396 657 ntBASIC20.26■□□□□ 0.83
Taf1aP97357 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1aP97357 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Taf1aP97357 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1aP97357 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1aP97357 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.25■□□□□ 0.83
Taf1aP97357 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Taf1aP97357 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1aP97357 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1aP97357 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Taf1aP97357 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Taf1aP97357 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1aP97357 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Taf1aP97357 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1aP97357 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.23■□□□□ 0.83
Taf1aP97357 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.23■□□□□ 0.83
Taf1aP97357 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Taf1aP97357 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1aP97357 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Taf1aP97357 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1aP97357 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.22■□□□□ 0.83
Taf1aP97357 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.22■□□□□ 0.83
Taf1aP97357 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1aP97357 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Taf1aP97357 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1aP97357 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.21■□□□□ 0.83
Taf1aP97357 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.21■□□□□ 0.83
Taf1aP97357 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1aP97357 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.21■□□□□ 0.83
Taf1aP97357 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.21■□□□□ 0.83
Taf1aP97357 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.21■□□□□ 0.83
Taf1aP97357 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1aP97357 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1aP97357 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Taf1aP97357 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.2■□□□□ 0.82
Taf1aP97357 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1aP97357 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.19■□□□□ 0.82
Taf1aP97357 Gm9812-201ENSMUST00000061934 968 ntBASIC20.19■□□□□ 0.82
Taf1aP97357 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1aP97357 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Taf1aP97357 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.18■□□□□ 0.82
Taf1aP97357 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Taf1aP97357 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms