Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gcm1P70348 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gcm1P70348 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gcm1P70348 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gcm1P70348 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Gcm1P70348 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Gcm1P70348 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gcm1P70348 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gcm1P70348 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gcm1P70348 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gcm1P70348 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gcm1P70348 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gcm1P70348 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gcm1P70348 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gcm1P70348 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gcm1P70348 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gcm1P70348 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gcm1P70348 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gcm1P70348 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gcm1P70348 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Gcm1P70348 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gcm1P70348 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Gcm1P70348 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gcm1P70348 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gcm1P70348 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gcm1P70348 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gcm1P70348 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gcm1P70348 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gcm1P70348 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gcm1P70348 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gcm1P70348 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gcm1P70348 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Gcm1P70348 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gcm1P70348 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gcm1P70348 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gcm1P70348 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gcm1P70348 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.38■□□□□ 0.53
Gcm1P70348 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gcm1P70348 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gcm1P70348 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gcm1P70348 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.37■□□□□ 0.53
Gcm1P70348 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gcm1P70348 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gcm1P70348 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gcm1P70348 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.36■□□□□ 0.53
Gcm1P70348 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.36■□□□□ 0.53
Gcm1P70348 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.36■□□□□ 0.53
Gcm1P70348 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gcm1P70348 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gcm1P70348 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gcm1P70348 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gcm1P70348 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gcm1P70348 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gcm1P70348 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gcm1P70348 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gcm1P70348 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gcm1P70348 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gcm1P70348 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gcm1P70348 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gcm1P70348 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gcm1P70348 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gcm1P70348 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gcm1P70348 Gm5921-201ENSMUST00000075898 882 ntBASIC18.33■□□□□ 0.52
Gcm1P70348 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Gcm1P70348 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.32■□□□□ 0.52
Gcm1P70348 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.32■□□□□ 0.52
Gcm1P70348 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gcm1P70348 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.32■□□□□ 0.52
Gcm1P70348 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gcm1P70348 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gcm1P70348 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gcm1P70348 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gcm1P70348 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gcm1P70348 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.31■□□□□ 0.52
Gcm1P70348 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gcm1P70348 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gcm1P70348 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gcm1P70348 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gcm1P70348 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gcm1P70348 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gcm1P70348 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Gcm1P70348 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gcm1P70348 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gcm1P70348 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gcm1P70348 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gcm1P70348 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gcm1P70348 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gcm1P70348 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gcm1P70348 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms