Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Six5P70178 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six5P70178 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six5P70178 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.62■□□□□ 0.89
Six5P70178 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six5P70178 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six5P70178 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Six5P70178 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Six5P70178 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six5P70178 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Six5P70178 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.6■□□□□ 0.89
Six5P70178 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six5P70178 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Six5P70178 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Six5P70178 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six5P70178 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six5P70178 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six5P70178 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Six5P70178 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six5P70178 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.58■□□□□ 0.89
Six5P70178 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Six5P70178 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six5P70178 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Six5P70178 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six5P70178 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.58■□□□□ 0.89
Six5P70178 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.58■□□□□ 0.88
Six5P70178 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Six5P70178 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Six5P70178 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six5P70178 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six5P70178 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six5P70178 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six5P70178 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.57■□□□□ 0.88
Six5P70178 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.56■□□□□ 0.88
Six5P70178 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six5P70178 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six5P70178 Gm14523-201ENSMUST00000117260 558 ntBASIC20.55■□□□□ 0.88
Six5P70178 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
Six5P70178 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Six5P70178 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six5P70178 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six5P70178 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.55■□□□□ 0.88
Six5P70178 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six5P70178 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Six5P70178 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six5P70178 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Six5P70178 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Six5P70178 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.53■□□□□ 0.88
Six5P70178 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six5P70178 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six5P70178 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six5P70178 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six5P70178 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Six5P70178 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.52■□□□□ 0.87
Six5P70178 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six5P70178 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six5P70178 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six5P70178 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.51■□□□□ 0.87
Six5P70178 Gm27502-201ENSMUST00000183495 199 ntBASIC20.51■□□□□ 0.87
Six5P70178 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six5P70178 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Six5P70178 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Six5P70178 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Six5P70178 Gm7332-201ENSMUST00000118351 454 ntBASIC20.5■□□□□ 0.87
Six5P70178 Gm22567-201ENSMUST00000175542 342 ntBASIC20.5■□□□□ 0.87
Six5P70178 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six5P70178 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six5P70178 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six5P70178 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.49■□□□□ 0.87
Six5P70178 Gm12366-201ENSMUST00000121722 873 ntBASIC20.49■□□□□ 0.87
Six5P70178 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.49■□□□□ 0.87
Six5P70178 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.49■□□□□ 0.87
Six5P70178 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.49■□□□□ 0.87
Six5P70178 Gm5786-201ENSMUST00000085368 882 ntBASIC20.49■□□□□ 0.87
Six5P70178 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Six5P70178 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms