Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sf3b6P59708 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sf3b6P59708 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b6P59708 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sf3b6P59708 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b6P59708 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b6P59708 Gm8503-201ENSMUST00000118131 455 ntBASIC19.65■□□□□ 0.74
Sf3b6P59708 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b6P59708 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Sf3b6P59708 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b6P59708 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3b6P59708 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3b6P59708 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Sf3b6P59708 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sf3b6P59708 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.64■□□□□ 0.73
Sf3b6P59708 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.64■□□□□ 0.73
Sf3b6P59708 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sf3b6P59708 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b6P59708 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b6P59708 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b6P59708 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3b6P59708 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b6P59708 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b6P59708 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b6P59708 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sf3b6P59708 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b6P59708 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Sf3b6P59708 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b6P59708 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b6P59708 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3b6P59708 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b6P59708 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b6P59708 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sf3b6P59708 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b6P59708 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.6■□□□□ 0.73
Sf3b6P59708 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b6P59708 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b6P59708 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b6P59708 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b6P59708 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3b6P59708 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.58■□□□□ 0.72
Sf3b6P59708 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b6P59708 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Sf3b6P59708 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sf3b6P59708 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3b6P59708 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3b6P59708 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3b6P59708 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3b6P59708 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.57■□□□□ 0.72
Sf3b6P59708 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3b6P59708 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3b6P59708 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3b6P59708 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.56■□□□□ 0.72
Sf3b6P59708 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.56■□□□□ 0.72
Sf3b6P59708 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sf3b6P59708 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Sf3b6P59708 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3b6P59708 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.54■□□□□ 0.72
Sf3b6P59708 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3b6P59708 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.54■□□□□ 0.72
Sf3b6P59708 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.54■□□□□ 0.72
Sf3b6P59708 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b6P59708 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b6P59708 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sf3b6P59708 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b6P59708 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b6P59708 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Sf3b6P59708 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Sf3b6P59708 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Sf3b6P59708 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.51■□□□□ 0.71
Sf3b6P59708 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Sf3b6P59708 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b6P59708 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.5■□□□□ 0.71
Sf3b6P59708 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Sf3b6P59708 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b6P59708 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b6P59708 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b6P59708 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.49■□□□□ 0.71
Sf3b6P59708 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b6P59708 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.49■□□□□ 0.71
Sf3b6P59708 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.49■□□□□ 0.71
Sf3b6P59708 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b6P59708 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b6P59708 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms