Protein–RNA interactions for Protein: P58406

Hrh3, Histamine H3 receptor, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hrh3P58406 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrh3P58406 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hrh3P58406 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Hrh3P58406 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrh3P58406 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrh3P58406 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrh3P58406 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrh3P58406 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hrh3P58406 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hrh3P58406 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.23■□□□□ 0.83
Hrh3P58406 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Hrh3P58406 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hrh3P58406 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hrh3P58406 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hrh3P58406 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.22■□□□□ 0.83
Hrh3P58406 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hrh3P58406 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hrh3P58406 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hrh3P58406 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hrh3P58406 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hrh3P58406 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Hrh3P58406 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.2■□□□□ 0.82
Hrh3P58406 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Hrh3P58406 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hrh3P58406 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.2■□□□□ 0.82
Hrh3P58406 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hrh3P58406 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hrh3P58406 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hrh3P58406 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hrh3P58406 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hrh3P58406 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hrh3P58406 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hrh3P58406 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
Hrh3P58406 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hrh3P58406 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.18■□□□□ 0.82
Hrh3P58406 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.17■□□□□ 0.82
Hrh3P58406 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hrh3P58406 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Hrh3P58406 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hrh3P58406 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.16■□□□□ 0.82
Hrh3P58406 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hrh3P58406 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hrh3P58406 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hrh3P58406 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hrh3P58406 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.15■□□□□ 0.82
Hrh3P58406 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hrh3P58406 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.15■□□□□ 0.82
Hrh3P58406 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hrh3P58406 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hrh3P58406 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hrh3P58406 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.14■□□□□ 0.82
Hrh3P58406 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hrh3P58406 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hrh3P58406 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hrh3P58406 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hrh3P58406 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hrh3P58406 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hrh3P58406 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hrh3P58406 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hrh3P58406 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hrh3P58406 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.12■□□□□ 0.81
Hrh3P58406 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hrh3P58406 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.11■□□□□ 0.81
Hrh3P58406 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.11■□□□□ 0.81
Hrh3P58406 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Hrh3P58406 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hrh3P58406 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hrh3P58406 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hrh3P58406 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hrh3P58406 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hrh3P58406 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hrh3P58406 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hrh3P58406 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hrh3P58406 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hrh3P58406 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hrh3P58406 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.09■□□□□ 0.81
Hrh3P58406 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hrh3P58406 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hrh3P58406 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hrh3P58406 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hrh3P58406 Gm10420-201ENSMUST00000121713 882 ntBASIC20.08■□□□□ 0.81
Hrh3P58406 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hrh3P58406 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hrh3P58406 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hrh3P58406 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hrh3P58406 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hrh3P58406 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hrh3P58406 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hrh3P58406 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hrh3P58406 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms