Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdx1P52946 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pdx1P52946 Gm14523-201ENSMUST00000117260 558 ntBASIC21.89■■□□□ 1.09
Pdx1P52946 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.89■■□□□ 1.09
Pdx1P52946 Gm12366-201ENSMUST00000121722 873 ntBASIC21.89■■□□□ 1.09
Pdx1P52946 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.89■■□□□ 1.09
Pdx1P52946 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.89■■□□□ 1.09
Pdx1P52946 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdx1P52946 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pdx1P52946 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.89■■□□□ 1.09
Pdx1P52946 Gm5786-201ENSMUST00000085368 882 ntBASIC21.89■■□□□ 1.09
Pdx1P52946 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdx1P52946 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pdx1P52946 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pdx1P52946 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.87■■□□□ 1.09
Pdx1P52946 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pdx1P52946 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Pdx1P52946 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.87■■□□□ 1.09
Pdx1P52946 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.86■■□□□ 1.09
Pdx1P52946 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdx1P52946 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Pdx1P52946 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pdx1P52946 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pdx1P52946 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pdx1P52946 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.85■■□□□ 1.09
Pdx1P52946 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pdx1P52946 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pdx1P52946 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdx1P52946 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdx1P52946 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdx1P52946 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pdx1P52946 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.84■■□□□ 1.09
Pdx1P52946 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pdx1P52946 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.83■■□□□ 1.09
Pdx1P52946 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdx1P52946 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pdx1P52946 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pdx1P52946 Gm7332-201ENSMUST00000118351 454 ntBASIC21.83■■□□□ 1.09
Pdx1P52946 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdx1P52946 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Pdx1P52946 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pdx1P52946 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdx1P52946 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdx1P52946 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pdx1P52946 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pdx1P52946 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.81■■□□□ 1.08
Pdx1P52946 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Pdx1P52946 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdx1P52946 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pdx1P52946 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Cap2-205ENSMUST00000225824 1634 ntBASIC21.8■■□□□ 1.08
Pdx1P52946 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.8■■□□□ 1.08
Pdx1P52946 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.8■■□□□ 1.08
Pdx1P52946 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pdx1P52946 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Pdx1P52946 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pdx1P52946 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pdx1P52946 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdx1P52946 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.78■■□□□ 1.08
Pdx1P52946 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdx1P52946 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pdx1P52946 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdx1P52946 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.77■■□□□ 1.08
Pdx1P52946 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdx1P52946 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pdx1P52946 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdx1P52946 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pdx1P52946 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.77■■□□□ 1.08
Pdx1P52946 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.77■■□□□ 1.08
Pdx1P52946 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Pdx1P52946 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdx1P52946 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.76■■□□□ 1.07
Pdx1P52946 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.76■■□□□ 1.07
Pdx1P52946 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pdx1P52946 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdx1P52946 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdx1P52946 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdx1P52946 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pdx1P52946 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdx1P52946 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdx1P52946 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdx1P52946 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pdx1P52946 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pdx1P52946 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms