Protein–RNA interactions for Protein: P50136

Bckdha, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdhaP50136 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BckdhaP50136 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.36■■□□□ 1.01
BckdhaP50136 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BckdhaP50136 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BckdhaP50136 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.35■■□□□ 1.01
BckdhaP50136 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BckdhaP50136 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BckdhaP50136 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BckdhaP50136 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
BckdhaP50136 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BckdhaP50136 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
BckdhaP50136 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
BckdhaP50136 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
BckdhaP50136 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.33■■□□□ 1.01
BckdhaP50136 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BckdhaP50136 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.33■■□□□ 1.01
BckdhaP50136 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BckdhaP50136 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BckdhaP50136 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
BckdhaP50136 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
BckdhaP50136 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.32■■□□□ 1
BckdhaP50136 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BckdhaP50136 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BckdhaP50136 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.32■■□□□ 1
BckdhaP50136 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.32■■□□□ 1
BckdhaP50136 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.32■■□□□ 1
BckdhaP50136 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BckdhaP50136 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.31■■□□□ 1
BckdhaP50136 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.31■■□□□ 1
BckdhaP50136 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.3■■□□□ 1
BckdhaP50136 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.3■■□□□ 1
BckdhaP50136 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BckdhaP50136 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.3■■□□□ 1
BckdhaP50136 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
BckdhaP50136 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BckdhaP50136 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.29■■□□□ 1
BckdhaP50136 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BckdhaP50136 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.29■■□□□ 1
BckdhaP50136 Gm27502-201ENSMUST00000183495 199 ntBASIC21.29■■□□□ 1
BckdhaP50136 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BckdhaP50136 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BckdhaP50136 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BckdhaP50136 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BckdhaP50136 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.28■■□□□ 1
BckdhaP50136 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.28■■□□□ 1
BckdhaP50136 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.28■■□□□ 1
BckdhaP50136 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BckdhaP50136 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BckdhaP50136 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.27■■□□□ 1
BckdhaP50136 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.27■■□□□ 1
BckdhaP50136 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BckdhaP50136 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BckdhaP50136 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.27■■□□□ 1
BckdhaP50136 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.27■■□□□ 1
BckdhaP50136 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BckdhaP50136 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BckdhaP50136 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BckdhaP50136 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BckdhaP50136 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
BckdhaP50136 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BckdhaP50136 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BckdhaP50136 Gm14523-201ENSMUST00000117260 558 ntBASIC21.25■□□□□ 0.99
BckdhaP50136 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.25■□□□□ 0.99
BckdhaP50136 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BckdhaP50136 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
BckdhaP50136 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BckdhaP50136 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BckdhaP50136 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BckdhaP50136 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BckdhaP50136 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BckdhaP50136 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BckdhaP50136 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.23■□□□□ 0.99
BckdhaP50136 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BckdhaP50136 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BckdhaP50136 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.23■□□□□ 0.99
BckdhaP50136 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BckdhaP50136 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BckdhaP50136 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BckdhaP50136 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BckdhaP50136 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.22■□□□□ 0.99
BckdhaP50136 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BckdhaP50136 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BckdhaP50136 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BckdhaP50136 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
BckdhaP50136 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BckdhaP50136 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.2■□□□□ 0.98
BckdhaP50136 Gm12366-201ENSMUST00000121722 873 ntBASIC21.2■□□□□ 0.98
BckdhaP50136 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.2■□□□□ 0.98
BckdhaP50136 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BckdhaP50136 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms