Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GdnfP48540 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GdnfP48540 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GdnfP48540 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GdnfP48540 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GdnfP48540 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.24■□□□□ 0.67
GdnfP48540 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.24■□□□□ 0.67
GdnfP48540 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.23■□□□□ 0.67
GdnfP48540 Gm7432-201ENSMUST00000210343 879 ntBASIC19.23■□□□□ 0.67
GdnfP48540 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GdnfP48540 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GdnfP48540 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.23■□□□□ 0.67
GdnfP48540 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GdnfP48540 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.22■□□□□ 0.67
GdnfP48540 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
GdnfP48540 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GdnfP48540 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GdnfP48540 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GdnfP48540 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.21■□□□□ 0.67
GdnfP48540 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GdnfP48540 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GdnfP48540 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GdnfP48540 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GdnfP48540 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GdnfP48540 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.19■□□□□ 0.66
GdnfP48540 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GdnfP48540 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GdnfP48540 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GdnfP48540 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.17■□□□□ 0.66
GdnfP48540 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GdnfP48540 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GdnfP48540 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GdnfP48540 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GdnfP48540 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GdnfP48540 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GdnfP48540 Gm11599-201ENSMUST00000118720 878 ntBASIC19.16■□□□□ 0.66
GdnfP48540 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.16■□□□□ 0.66
GdnfP48540 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GdnfP48540 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GdnfP48540 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
GdnfP48540 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GdnfP48540 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GdnfP48540 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.16■□□□□ 0.66
GdnfP48540 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.15■□□□□ 0.66
GdnfP48540 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
GdnfP48540 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GdnfP48540 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GdnfP48540 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GdnfP48540 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GdnfP48540 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GdnfP48540 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.14■□□□□ 0.65
GdnfP48540 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GdnfP48540 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GdnfP48540 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GdnfP48540 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GdnfP48540 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GdnfP48540 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GdnfP48540 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.12■□□□□ 0.65
GdnfP48540 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GdnfP48540 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GdnfP48540 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GdnfP48540 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GdnfP48540 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GdnfP48540 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GdnfP48540 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GdnfP48540 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GdnfP48540 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GdnfP48540 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GdnfP48540 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GdnfP48540 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GdnfP48540 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GdnfP48540 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
GdnfP48540 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GdnfP48540 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GdnfP48540 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.08■□□□□ 0.64
GdnfP48540 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms