Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hist1h1aP43275 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h1aP43275 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h1aP43275 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hist1h1aP43275 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.13■□□□□ 0.49
Hist1h1aP43275 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist1h1aP43275 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h1aP43275 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h1aP43275 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h1aP43275 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hist1h1aP43275 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h1aP43275 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h1aP43275 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h1aP43275 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h1aP43275 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h1aP43275 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.09■□□□□ 0.49
Hist1h1aP43275 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.09■□□□□ 0.49
Hist1h1aP43275 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h1aP43275 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h1aP43275 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h1aP43275 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h1aP43275 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h1aP43275 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.08■□□□□ 0.48
Hist1h1aP43275 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.08■□□□□ 0.48
Hist1h1aP43275 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Hist1h1aP43275 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Gm8503-201ENSMUST00000118131 455 ntBASIC18.07■□□□□ 0.48
Hist1h1aP43275 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h1aP43275 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Hist1h1aP43275 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h1aP43275 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.05■□□□□ 0.48
Hist1h1aP43275 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h1aP43275 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.05■□□□□ 0.48
Hist1h1aP43275 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Hist1h1aP43275 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h1aP43275 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hist1h1aP43275 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist1h1aP43275 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hist1h1aP43275 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hist1h1aP43275 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hist1h1aP43275 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.03■□□□□ 0.48
Hist1h1aP43275 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
Hist1h1aP43275 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hist1h1aP43275 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hist1h1aP43275 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hist1h1aP43275 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hist1h1aP43275 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hist1h1aP43275 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Hist1h1aP43275 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hist1h1aP43275 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hist1h1aP43275 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hist1h1aP43275 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.01■□□□□ 0.47
Hist1h1aP43275 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hist1h1aP43275 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms