Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.59■■□□□ 1.53
HttP42859 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HttP42859 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HttP42859 Gm7417-201ENSMUST00000192950 473 ntBASIC24.59■■□□□ 1.53
HttP42859 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.58■■□□□ 1.53
HttP42859 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
HttP42859 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
HttP42859 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HttP42859 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.58■■□□□ 1.53
HttP42859 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HttP42859 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HttP42859 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HttP42859 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HttP42859 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HttP42859 Gm22238-201ENSMUST00000175222 88 ntBASIC24.57■■□□□ 1.52
HttP42859 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HttP42859 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
HttP42859 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.56■■□□□ 1.52
HttP42859 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HttP42859 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HttP42859 Gm8495-201ENSMUST00000188740 694 ntBASIC24.55■■□□□ 1.52
HttP42859 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HttP42859 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.55■■□□□ 1.52
HttP42859 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.55■■□□□ 1.52
HttP42859 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HttP42859 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HttP42859 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.55■■□□□ 1.52
HttP42859 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HttP42859 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
HttP42859 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.53■■□□□ 1.52
HttP42859 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.53■■□□□ 1.52
HttP42859 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HttP42859 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.53■■□□□ 1.52
HttP42859 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HttP42859 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.52■■□□□ 1.52
HttP42859 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HttP42859 Gm12821-201ENSMUST00000120022 600 ntBASIC24.52■■□□□ 1.52
HttP42859 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.51■■□□□ 1.51
HttP42859 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HttP42859 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
HttP42859 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HttP42859 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HttP42859 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.5■■□□□ 1.51
HttP42859 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
HttP42859 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HttP42859 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HttP42859 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HttP42859 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.49■■□□□ 1.51
HttP42859 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.49■■□□□ 1.51
HttP42859 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HttP42859 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
HttP42859 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.49■■□□□ 1.51
HttP42859 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
HttP42859 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
HttP42859 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HttP42859 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HttP42859 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HttP42859 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.48■■□□□ 1.51
HttP42859 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HttP42859 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
HttP42859 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HttP42859 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
HttP42859 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
HttP42859 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HttP42859 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HttP42859 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HttP42859 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.46■■□□□ 1.51
HttP42859 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HttP42859 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HttP42859 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
HttP42859 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HttP42859 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.44■■□□□ 1.5
HttP42859 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.44■■□□□ 1.5
HttP42859 Gm45417-201ENSMUST00000209533 758 ntBASIC24.44■■□□□ 1.5
HttP42859 Golgb1-201ENSMUST00000023534 498 ntBASIC24.44■■□□□ 1.5
HttP42859 Gm18284-201ENSMUST00000172604 624 ntBASIC24.43■■□□□ 1.5
HttP42859 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.43■■□□□ 1.5
HttP42859 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HttP42859 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HttP42859 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HttP42859 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HttP42859 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
HttP42859 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.41■■□□□ 1.5
HttP42859 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.41■■□□□ 1.5
HttP42859 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
HttP42859 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
HttP42859 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HttP42859 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HttP42859 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
HttP42859 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.5
HttP42859 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HttP42859 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HttP42859 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.39■■□□□ 1.5
HttP42859 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HttP42859 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms