Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nkx2-2P42586 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkx2-2P42586 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-2P42586 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.36■□□□□ 0.85
Nkx2-2P42586 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nkx2-2P42586 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-2P42586 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.35■□□□□ 0.85
Nkx2-2P42586 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-2P42586 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-2P42586 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-2P42586 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.33■□□□□ 0.84
Nkx2-2P42586 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Nkx2-2P42586 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-2P42586 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nkx2-2P42586 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-2P42586 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-2P42586 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-2P42586 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-2P42586 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-2P42586 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-2P42586 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nkx2-2P42586 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-2P42586 Mir6538-201ENSMUST00000183713 110 ntBASIC20.3■□□□□ 0.84
Nkx2-2P42586 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.3■□□□□ 0.84
Nkx2-2P42586 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-2P42586 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-2P42586 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-2P42586 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-2P42586 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nkx2-2P42586 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nkx2-2P42586 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-2P42586 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-2P42586 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nkx2-2P42586 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-2P42586 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-2P42586 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nkx2-2P42586 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx2-2P42586 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.27■□□□□ 0.84
Nkx2-2P42586 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-2P42586 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nkx2-2P42586 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Gm27502-201ENSMUST00000183495 199 ntBASIC20.26■□□□□ 0.83
Nkx2-2P42586 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx2-2P42586 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nkx2-2P42586 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-2P42586 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-2P42586 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-2P42586 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx2-2P42586 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-2P42586 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nkx2-2P42586 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-2P42586 Gm22567-201ENSMUST00000175542 342 ntBASIC20.24■□□□□ 0.83
Nkx2-2P42586 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-2P42586 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-2P42586 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Gm14523-201ENSMUST00000117260 558 ntBASIC20.23■□□□□ 0.83
Nkx2-2P42586 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.23■□□□□ 0.83
Nkx2-2P42586 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-2P42586 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-2P42586 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx2-2P42586 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-2P42586 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-2P42586 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-2P42586 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-2P42586 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.21■□□□□ 0.83
Nkx2-2P42586 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nkx2-2P42586 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-2P42586 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nkx2-2P42586 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.2■□□□□ 0.82
Nkx2-2P42586 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Nkx2-2P42586 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-2P42586 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nkx2-2P42586 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms