Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rab3dP35276 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rab3dP35276 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rab3dP35276 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.47■□□□□ 0.55
Rab3dP35276 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab3dP35276 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab3dP35276 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab3dP35276 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
Rab3dP35276 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab3dP35276 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.45■□□□□ 0.54
Rab3dP35276 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab3dP35276 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab3dP35276 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab3dP35276 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab3dP35276 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab3dP35276 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab3dP35276 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab3dP35276 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rab3dP35276 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab3dP35276 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rab3dP35276 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab3dP35276 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rab3dP35276 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3dP35276 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3dP35276 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.42■□□□□ 0.54
Rab3dP35276 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3dP35276 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab3dP35276 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Rab3dP35276 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab3dP35276 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab3dP35276 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab3dP35276 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rab3dP35276 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rab3dP35276 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.4■□□□□ 0.54
Rab3dP35276 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab3dP35276 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rab3dP35276 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rab3dP35276 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3dP35276 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3dP35276 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab3dP35276 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3dP35276 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rab3dP35276 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3dP35276 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.38■□□□□ 0.53
Rab3dP35276 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.38■□□□□ 0.53
Rab3dP35276 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3dP35276 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3dP35276 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.38■□□□□ 0.53
Rab3dP35276 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab3dP35276 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.37■□□□□ 0.53
Rab3dP35276 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.37■□□□□ 0.53
Rab3dP35276 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab3dP35276 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3dP35276 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rab3dP35276 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rab3dP35276 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rab3dP35276 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3dP35276 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.35■□□□□ 0.53
Rab3dP35276 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rab3dP35276 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rab3dP35276 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rab3dP35276 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3dP35276 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab3dP35276 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.33■□□□□ 0.52
Rab3dP35276 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.33■□□□□ 0.52
Rab3dP35276 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rab3dP35276 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3dP35276 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.32■□□□□ 0.52
Rab3dP35276 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab3dP35276 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3dP35276 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab3dP35276 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab3dP35276 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab3dP35276 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab3dP35276 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab3dP35276 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rab3dP35276 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Rab3dP35276 Gm37136-201ENSMUST00000194368 194 ntBASIC18.29■□□□□ 0.52
Rab3dP35276 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab3dP35276 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms