Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf9P20334 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf9P20334 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf9P20334 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf9P20334 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf9P20334 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.71■□□□□ 0.43
Tnfrsf9P20334 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf9P20334 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Tnfrsf9P20334 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf9P20334 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf9P20334 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf9P20334 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf9P20334 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf9P20334 Gm45102-201ENSMUST00000207427 857 ntBASIC17.69■□□□□ 0.42
Tnfrsf9P20334 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf9P20334 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf9P20334 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf9P20334 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.66■□□□□ 0.42
Tnfrsf9P20334 Gm44428-201ENSMUST00000204474 874 ntBASIC17.66■□□□□ 0.42
Tnfrsf9P20334 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Tnfrsf9P20334 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf9P20334 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf9P20334 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf9P20334 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf9P20334 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Gm43566-201ENSMUST00000196851 808 ntBASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf9P20334 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.63■□□□□ 0.41
Tnfrsf9P20334 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf9P20334 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Gm9959-201ENSMUST00000068277 390 ntBASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf9P20334 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms