Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TP20293 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TP20293 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TP20293 Mir6538-201ENSMUST00000183713 110 ntBASIC20.65■□□□□ 0.9
TP20293 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TP20293 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TP20293 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TP20293 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TP20293 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TP20293 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
TP20293 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TP20293 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.64■□□□□ 0.89
TP20293 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TP20293 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
TP20293 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.64■□□□□ 0.89
TP20293 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TP20293 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TP20293 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.63■□□□□ 0.89
TP20293 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.63■□□□□ 0.89
TP20293 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.63■□□□□ 0.89
TP20293 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TP20293 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.63■□□□□ 0.89
TP20293 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TP20293 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TP20293 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TP20293 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TP20293 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TP20293 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TP20293 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.61■□□□□ 0.89
TP20293 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TP20293 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TP20293 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TP20293 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TP20293 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TP20293 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TP20293 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TP20293 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TP20293 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TP20293 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TP20293 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TP20293 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.59■□□□□ 0.89
TP20293 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TP20293 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TP20293 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TP20293 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TP20293 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TP20293 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TP20293 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.58■□□□□ 0.88
TP20293 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.58■□□□□ 0.88
TP20293 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TP20293 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TP20293 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.57■□□□□ 0.88
TP20293 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TP20293 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
TP20293 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TP20293 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.56■□□□□ 0.88
TP20293 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TP20293 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Gm44428-201ENSMUST00000204474 874 ntBASIC20.56■□□□□ 0.88
TP20293 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TP20293 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TP20293 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TP20293 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.54■□□□□ 0.88
TP20293 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.54■□□□□ 0.88
TP20293 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TP20293 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.53■□□□□ 0.88
TP20293 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TP20293 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TP20293 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TP20293 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.52■□□□□ 0.88
TP20293 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TP20293 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TP20293 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.51■□□□□ 0.87
TP20293 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TP20293 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.5■□□□□ 0.87
TP20293 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TP20293 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.5■□□□□ 0.87
TP20293 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TP20293 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TP20293 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TP20293 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TP20293 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TP20293 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TP20293 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms